Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3573 ATGGGAGACGTGGCTAAGGACCTCGCAGTTGGGACTGTTGGAGGGGCATCACAATTGATAGTTGGACACCCCTTTGACACCATCAAGGTCAAGCTCCAAAGCCAGCCTACACTACTCCCCGGTCAGCCTCCCAAGTTTTCTGGTGCATTTGATGCCGTCAAGCAGACAATAGCAGCTGAAGGTCCGAGGGGTTTATTCAAAGGTATGGGTGCCCCGCTTGCTACGGTAGCAACCTTCAATGCTGTCCTGTTTACAGTGAGGTCCCATCCTGGTGCTCCCCTCACAGTCAGTCAGCAGTTTATTTGTGGAGCTGGAGCTGGAGTTGCTGTTTCCTTTCTTCGTTGCCCAACTGAATTAATCAAATGCAGGTTGCAAGCACAAAGTGCACTTGGTGGCTCCGGAGCAGCTGATGGGGCTGTTAAGTACGGAGGATCCATGGATGTGGCCAGGCAGGTTCTCCGGTCAGAGGGAGGCACAAAAGGTCTTTTCAAGGGCTTGGTTCCCACCATGGCACGTGAGATACCTGGAAATGCTATCATGTTTGGTGTATATGAAGCAATAAATCAATGGATTGCAGGAGGCACTGATACTTCTGGACTAGGTAGAGGTTCTCTGATTGTTGCAGGAGGCTTGGCTGGAGCTTCCTTCTGGTTGCTGGTTTACCCAACTGATGTTGTTAAAAGTGTGATTCAAGTAGATGACTACAAAAACCCAAAGTTTTATGGCTCATTAGATGCTTTCAGAAAGATTCAAGCTACACAGGGGTTCAAAGGCCTTTATAAAGGTTTTGGTCCTGCAATGGCCCGAAGTATTCCTGCAAATGCAATTGTCTTCTTAGCATATGAGATGACAAGATCAGCATTGGGATGA 870 0.4839 MGDVAKDLAVGTVGGASQLIVGHPFDTIKVKLQSQPTLLPGQPPKFSGAFDAVKQTIAAEGPRGLFKGMGAPLATVATFNAVLFTVRSHPGAPLTVSQQFICGAGAGVAVSFLRCPTELIKCRLQAQSALGGSGAADGAVKYGGSMDVARQVLRSEGGTKGLFKGLVPTMAREIPGNAIMFGVYEAINQWIAGGTDTSGLGRGSLIVAGGLAGASFWLLVYPTDVVKSVIQVDDYKNPKFYGSLDAFRKIQATQGFKGLYKGFGPAMARSIPANAIVFLAYEMTRSALG* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3573 289 ProSiteProfiles Solute carrier (Solcar) repeat profile. 94 190 IPR018108 -
Lja3g3573 289 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Lja3g3573 289 ProSiteProfiles Solute carrier (Solcar) repeat profile. 200 287 IPR018108 -
Lja3g3573 289 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 289 - -
Lja3g3573 289 Pfam Mitochondrial carrier protein 94 191 IPR018108 -
Lja3g3573 289 Pfam Mitochondrial carrier protein 206 288 IPR018108 -
Lja3g3573 289 Pfam Mitochondrial carrier protein 4 86 IPR018108 -
Lja3g3573 289 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 289 - -
Lja3g3573 289 Gene3D Mitochondrial carrier domain 88 289 IPR023395 -
Lja3g3573 289 Gene3D Mitochondrial carrier domain 2 87 IPR023395 -
Lja3g3573 289 SUPERFAMILY Mitochondrial carrier 3 282 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3573 Lja-Chr3 70776350 70778458 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3573 22 288 Antiporters AT1G79900 32.734 4.96e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3573 K15109 - gmx:100787304 475.707