Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3537 ATGGGGTTTTTGTTGAAAGAAGCTTTGAAGTCTCTGTGTGATCGGAACCAGTGGTCTTATGCTGTTTTCTGGAAGATCGGTTGTCAAAATTCCAAGCTGTTAATTTGGGAAGATTGCTATTATGAACCCTTGCCATGTCCATTCCCTCCACGTAATTTTGGGACGTCATCTCAGCTAGGGATTCAAGAGGAGGACAGAGTCGGTTCTTTGATTAACAAAATGGCAGTAAATAATTCAGTCGTTGTTGCAGGTGAAGGTATGATTGGACGGGCTGCATTTTCAGGCAGCCATCAGTGGATTCTTTTGTACAATTTCACTACAGATGCATATCCACCTGAGGTAAATGCTGAAGTGTTTCACCAAATTTCAGCTGGAATGCAGACAGTAGCAGTTATTCCTGTGCTGCCTCACGGCGTTGTTCAACTTGGTTCATTCTTGCCAATAATGGAGAATTTGGGATTTTTGAATGGTGTGAAAAGCTTGATCTTGCAATTGGGATGTGTTCCCGGTGCCCTTCTATCAGAAGATTATTCAGCAAAACGTTCAAATGAAAGACTTACCGGACCTTCTGCTTCTGGTGTGGCTCTGTCCGTTGATCCACCAGTAATTACCTCGAGCTGCACTCCCTCAGTAGCTATAGGATCCAATCAGCGAAGTAGCTCATCTCATGCTTCAGGACCTATTGTTCGAACACTTGGTCCTCTGAGGGGAGAAATAAATACTTGCCAGGCTGCTGAGTTGACATCCCAAAAGCATAACCCGAACCAGATATCTAACAACCTTTGCCAACCAAAGTTAATTCCAGTGAGTAAAGCAAGCTTTGCTGGCCAATGGAAAGATCGAGCTGTGGAAGTTGAAGTGATACCCTCAAATCTTGGTTCATCCCTGCAACAGCATTCTGTATCAAATAATGCAAGATCTGCGTTCAATAATTTTCCTAGTTGTGGAGCGTTTAGCCAATCAGGTCTTAGTGACCACAGTCTAAAACATATGGAACAGCAAATCATGGAAGCCATTCGGAGTCGAGACAATGTTAATAATCCCAGTATTGATGCCTCAAGTACCTTAAACATGTCTCAACAAACAGATGGAGACCATGTACTAGGGCACAATTTGAGTTCTGGGAGTACTCCATTACTTAGAGGAATCCCAGTACGTGATGGGATGAGTAGTCTTTTGATAAAAAATCTGATTACGAGTTCAAAATCTCCAAAAGTATCCACAGCTGATTTATCTGGACCACAAGAAATTGGGAGTGGACTTCAACATGCCTTTTCCATGCCTCTAGAAGGTTCTGATCAGAAGATTTCCCCTGGAAATTTGAAATATGCTTCAACAGATCTAAAGATAGACTATGATTTGCTTCAGGAACCTGATATCCTCCCTTTTCATGTTGAGGAGCATGTTCGTATTAGTGGTCAAATCCCTGGTCTTGCTCACGATTTCCTTCATAAAGATAGTACCGCTCAATCTACGGTGACGATGAATCGTAAACACGAACAAGCTATTGTTCAACCTCCATCAGGGGATGACCTGTTTGATGTTTTCGGTGTAGATTTTAGAAACAAACTTCTGAATGGAGACTGGAATGAACTGCTTGCTTATGAATCGAATTGTACTGCAGAAAATATGGTTAACAAGGAAGCATACATGAATATGCAGGGTAGAAATTCTGATTGCTATTCAGTCCATGTACCAGTATCAGAAAGTGGCATTTTTTCTGGGATTGGAACAGATCACCTCTTGGATGCTGTCGTCTCAAAGGCCAAACCTATTACAAGACAGAATTCGGATGACATGTCTTGCTGGACAACAGTGACAGGGAGCAGCACCTCCTCTGTTCCCTCCCCAGTTTTCAAGAAGGTTGGGCCTGGTCATTTGCAAGGGGGATTGTTTAATTTTTCTAAGAATGGTGGTAAAACCGGTACTGTAGAAACTAGTTCTCTAAGGTCTAGATGTAGCAAGGATGATGCTGGGAAAAGTTCTCCATCTTCTGCTATTTATGGGTCACAACTTAGTTCATGGATTGAGAATGTTGGCGGCGATGTGAAGTGTGAAAATAGTGTTTCAACTGGATACTCGAAGCAGTCGCGCGAAGCTGGTAAATCAAATCGTAAAAGGCTTAAACTAGGAGAGAATCCCAGGCCTCGACCAAAAGATCGCCAAATGATTCAAGATCGTGTGAAAGAGCTACGAGAACTTGTGCCAAATGGAGAAAAATGTAGCATAGATGCACTACTGGAAAGGACCATAAAGCATATGCGTTTCATGCAAAGTGTGACAAAGCATGCTGACAAGCTGAAACAGACAGGGGAGTCTAAGATTATTAGTAAGGAAGGTGGGCTCCTTTTGGAAGACATATTTGAGGGGGCTACACGGGCGTACGAGCTCGGATCCCAGTCAATGTTTTGCCCTCTCATAGTTGATGATCTGGATCCTCCTCGTCGAATGTTAGTGGAGATGCTTTGCGAGGAACGAGGTTTTTTTCTGGAAATAGCTGACTTCATCAGAGGATTAGGTCTAACAATCTTAAAGGGGGTAATGGAAGCTCACGGTGACAAAATCTGGGCTCGCTTTGCTGTTGAGGCAAACCGGGACATAACGAGGATGGAAATATTTATGCCACTTGTTCATCTTTTGGATCAACAGTGA 2652 0.4291 MGFLLKEALKSLCDRNQWSYAVFWKIGCQNSKLLIWEDCYYEPLPCPFPPRNFGTSSQLGIQEEDRVGSLINKMAVNNSVVVAGEGMIGRAAFSGSHQWILLYNFTTDAYPPEVNAEVFHQISAGMQTVAVIPVLPHGVVQLGSFLPIMENLGFLNGVKSLILQLGCVPGALLSEDYSAKRSNERLTGPSASGVALSVDPPVITSSCTPSVAIGSNQRSSSSHASGPIVRTLGPLRGEINTCQAAELTSQKHNPNQISNNLCQPKLIPVSKASFAGQWKDRAVEVEVIPSNLGSSLQQHSVSNNARSAFNNFPSCGAFSQSGLSDHSLKHMEQQIMEAIRSRDNVNNPSIDASSTLNMSQQTDGDHVLGHNLSSGSTPLLRGIPVRDGMSSLLIKNLITSSKSPKVSTADLSGPQEIGSGLQHAFSMPLEGSDQKISPGNLKYASTDLKIDYDLLQEPDILPFHVEEHVRISGQIPGLAHDFLHKDSTAQSTVTMNRKHEQAIVQPPSGDDLFDVFGVDFRNKLLNGDWNELLAYESNCTAENMVNKEAYMNMQGRNSDCYSVHVPVSESGIFSGIGTDHLLDAVVSKAKPITRQNSDDMSCWTTVTGSSTSSVPSPVFKKVGPGHLQGGLFNFSKNGGKTGTVETSSLRSRCSKDDAGKSSPSSAIYGSQLSSWIENVGGDVKCENSVSTGYSKQSREAGKSNRKRLKLGENPRPRPKDRQMIQDRVKELRELVPNGEKCSIDALLERTIKHMRFMQSVTKHADKLKQTGESKIISKEGGLLLEDIFEGATRAYELGSQSMFCPLIVDDLDPPRRMLVEMLCEERGFFLEIADFIRGLGLTILKGVMEAHGDKIWARFAVEANRDITRMEIFMPLVHLLDQQ* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3537 883 CDD bHLH_AtLHW_like 712 781 - -
Lja3g3537 883 MobiDBLite consensus disorder prediction 636 665 - -
Lja3g3537 883 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 882 - -
Lja3g3537 883 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 708 757 IPR011598 GO:0046983
Lja3g3537 883 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 882 IPR043561 GO:0003700|GO:0006355
Lja3g3537 883 MobiDBLite consensus disorder prediction 687 723 - -
Lja3g3537 883 MobiDBLite consensus disorder prediction 699 723 - -
Lja3g3537 883 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 161 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3537 Lja-Chr3 70235492 70242357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3537 510 882 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 50.667 2.20e-100 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3537 - - lja:Lj0g3v0068479.1 1743.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3537 3 70235492 70242357 Lja3g1029 3 10588378 10595985 PCT