Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3524 ATGGATCCCTTCCTCCGCAAGCTCCGCCGCCACCTCCTCCGTTGGCTCCACCGATCTCGCCGCTCCGGATCGGTGTTCTTTGTGAGGAGAATTTCGTACAACGATGTTCGAAGCGCAACCGATGGTTTCCGCAGAGTGGTTTTCAGCAATTCTGAAGTTTCTGCATATGCGGCCAATTTTGGAGAGGGTGGTGGTGGTGTTTGCTTGGTGAAAGAATTGAAAGATTTTGATCAACGAAATGGTGACAGTTTTCACCAACAAGTGCAGTTCTTGGGGCGCTTGCATCATCGCCACCTTCTCTCGCTCAAAGGCTTTTCTGTTGGACGCAATCGCAAGAGACTGCTCATATTTGACAACATAGAAAATGGAAGCTTAAAGGAGCATCTAAATGACCCTTTGAAGACTCCCTTGAGTTGGAGGACAAGGTTGCAGATAGCTAATGGTGTTGTGGCCGCACTGAAATACTTGTTTCTTTTCAGTGATCCACCAGTATGTCATGTCTCTATCAGCTCAGGCAATATTATGTTGGACGAAAACTTCACTGCTAAGCTATCTGACTTTGGCCTTCTTACATCTGGTGGAAATTCTGTCATGATCCCAAAATCAGAAGATTCCATGGGGCAGAAAAGTTGCAAGATTATATTCCAACTTGGAGTGCTCATACTGGAATTGGTAACAGGTCAGTCTTCAGAGATGGAAGGTTCTGATTTAGTTGAATGGATCCAAGAGTCCCGATTTTACAGTTCGATAGATAAGATGATAGACCCTGATCTTGGGAACAGTTATGACTGTACTGAGCTTAAAAGTCTTCTAGCGGTCGCAAAATTATGTATCAAATCATGGGACAAGCCTTCATTTACAATTCCTCAGTTTTTTGGGTATCTCCAAAACAAGATTGATATTCCCCATAACTAG 915 0.4415 MDPFLRKLRRHLLRWLHRSRRSGSVFFVRRISYNDVRSATDGFRRVVFSNSEVSAYAANFGEGGGGVCLVKELKDFDQRNGDSFHQQVQFLGRLHHRHLLSLKGFSVGRNRKRLLIFDNIENGSLKEHLNDPLKTPLSWRTRLQIANGVVAALKYLFLFSDPPVCHVSISSGNIMLDENFTAKLSDFGLLTSGGNSVMIPKSEDSMGQKSCKIIFQLGVLILELVTGQSSEMEGSDLVEWIQESRFYSSIDKMIDPDLGNSYDCTELKSLLAVAKLCIKSWDKPSFTIPQFFGYLQNKIDIPHN* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3524 304 ProSiteProfiles Protein kinase domain profile. 33 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g3524 304 PANTHER OS01G0253100 PROTEIN 1 300 IPR045271 GO:0004714|GO:0006468
Lja3g3524 304 Gene3D Transferase(Phosphotransferase) domain 1 120 211 - -
Lja3g3524 304 Gene3D Transferase(Phosphotransferase) domain 1 214 303 - -
Lja3g3524 304 Gene3D Phosphorylase Kinase; domain 1 17 118 - -
Lja3g3524 304 Pfam Protein tyrosine and serine/threonine kinase 67 193 IPR001245 GO:0004672|GO:0006468
Lja3g3524 304 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 300 - -
Lja3g3524 304 SUPERFAMILY Protein kinase-like (PK-like) 28 266 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3524 Lja-Chr3 69940058 69942509 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3524 23 303 Receptor kinase-like Gene Family AT3G19300 36.184 6.40e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Lja3g3524 PK_Tyr_Ser-Thr 3.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3524 - - gmx:100791979 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3524 3 69940058 69942509 Lja3g3524 3 69940058 69942509 ECH