Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3510 ATGGAGCTGAGCCCCTCTTTCTGTATTTCATTCATTGCCTTCCTTCTCTTTCTCATCATCTTATTCAAGTCACTTAAAAGATCAAGTTCTAAGAACTTACCCCCAGGACCATGGACACTACCTTTGATAGGAAACATACACCAGATTGCAAGCTCATTGCCCCATCACAGCCTCAGAAATTTGGCAAACAAGTATGGACCCTTAATGCACCTAAAACTAGGAGAGGTATCCCAAATCATAATCACTTCACCAGAAATTGCAAAACAGGTTATGAAAACACATGAACTTAATTTTTGTGATAGGCCAAACTTGCTTTTGTCCTCAATATTTACTTACAATGCTACAGACATTGTTTTCTCTCCATATGGAGAATACTGGAGGCAAGTGAAAAAACTATGCAACACAGAGCTGTTAAGCGCGAAGCGGGTACAATCGTTTAGGTCCATCAGAGAAGAGGAGGTGTCAGAGGTTGTGAAAGCAATAGCTGCTAGTCAAGGATCGGTTATTAATCTCACCGAGAAGATTTCCTCACTGACTTATGGGATAACAGCACGTGCAGCTTTCGGGAAGAAAAACAGACACCAACAAGAGTTCATATCAACTTTGAAGGAAGCACAGGAGATGCTAGCAGGGTTTTGTGTTGCTGATCTCTATCCTTCTATTAGAGTGCTTCAGAGGATGGGTAAGGCCAAAATGGAAAAACTGCACAGACAAATTGATAAGATATTGCAAGACATCATCGATGATCACAAAACTGAAGATTCCAGGAACCAGGAAACAGGGAGTACTGAAGATATAGTCGATGTTCTTCTCAAGCTTCAACTAGAGCAGGAAAAGAACTCGGAATATACCTTGACTGATGACAATGTTAAAGCTATCATCCTGGACTTGTTCGGCGCTGGTGGAGAAACAATTTCAGGGGTTGTGATATGGGGGATGTCAGAAATGGTAAAGAACCCAAAGGTGATGGAAGAAGCACAAGCTGAAGTAAGAAGGGTGTTTGATAGGAAGGGGAATGTGGATGAGCAAGACATGCACAAGTTGGTATACTTAAAGTCTGTTATTAAAGAAGTTCTAAGGCTGCATCCATCTATACCTTTATTAGTTCCAAGGGAATGTAGGGAGAGATGCCAAATCAATGGGTATGAGATACCCAGCAAGAGCAGAGTCGCTATCAATATTTGGGCTATTGGAAGAGATTTCAGGTATTGGGATGAAGCTGAGACTTTTAAACCCGAGAGATTTCTTAATAGCCAAATTAATTTTACAGGCACAAACTTTGAATATCTCCCATTTGGTGTTGGAAGGAGGATGTGCCCGGGCATAGCATTTGCCTTACCCGCCATTGAGCTGCCACTTGCTCAATTACTTTACCACTTTGATTGGAAGCTTCTCAATGGAATGAAGAATGAAGAACTTGACATGACTGAGTCATTTGGACTTGCTCTAAGAAAATCTAAAGACCTCTACTTGATTCCCATTTCTCGTCAATATCAATAG 1500 0.4113 MELSPSFCISFIAFLLFLIILFKSLKRSSSKNLPPGPWTLPLIGNIHQIASSLPHHSLRNLANKYGPLMHLKLGEVSQIIITSPEIAKQVMKTHELNFCDRPNLLLSSIFTYNATDIVFSPYGEYWRQVKKLCNTELLSAKRVQSFRSIREEEVSEVVKAIAASQGSVINLTEKISSLTYGITARAAFGKKNRHQQEFISTLKEAQEMLAGFCVADLYPSIRVLQRMGKAKMEKLHRQIDKILQDIIDDHKTEDSRNQETGSTEDIVDVLLKLQLEQEKNSEYTLTDDNVKAIILDLFGAGGETISGVVIWGMSEMVKNPKVMEEAQAEVRRVFDRKGNVDEQDMHKLVYLKSVIKEVLRLHPSIPLLVPRECRERCQINGYEIPSKSRVAINIWAIGRDFRYWDEAETFKPERFLNSQINFTGTNFEYLPFGVGRRMCPGIAFALPAIELPLAQLLYHFDWKLLNGMKNEELDMTESFGLALRKSKDLYLIPISRQYQ* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3510 499 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3510 499 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3510 499 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3510 499 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3510 499 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3510 499 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3510 499 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3510 499 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3510 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Lja3g3510 499 PANTHER CYTOCHROME P450 71D10 9 496 - -
Lja3g3510 499 SUPERFAMILY Cytochrome P450 34 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3510 499 Gene3D Cytochrome P450 26 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3510 499 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3510 499 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3510 499 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3510 499 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3510 499 Pfam Cytochrome P450 34 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3510 499 PANTHER CYTOCHROME P450 71B11-RELATED 9 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3510 Lja-Chr3 69707251 69709031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3510 12 498 Cytochrome P450 AT5G25120 41.616 6.43e-140 410