Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3509 ATGGCGAACATTGGCAATTCACGAGAGGAATCAGAAGATGAAGAAGGCTTCTCGTATGCTATGCACCTTGTCAACTATACTGTGTTTCCCCTGTCATTACAAACCGCCACTGAACTTGGAGTATTTGACGTGTTGCAAAAAGCAGGTCCAAATGCTAAGCTCTCTGCTAAGCAGATTGCGTCCCAGCTTTCGTGCAACAAGAATCCAGCAGCGCCTTCAATGCTAGATCGCATCCTCGCCCTTCTTGCTTCGAACTCTGTTCTTAAATGCTCTGTCTCTGTCCTTCAAGATGATGAACAAAACCTTGAAGCCTTTCAGAGACTCTACACCATCACTCCTGTAGCCTCATTGTTTGCTCGCAATTCTGATGGTGTTTCCTTAGGGCCATTGATGGCCTTAAGTCATGACAAGGTCTTCCAAGCTAGCTGGTCCCAACTGAAAGATGCAATTCGGGAAGGGGGAATTCCATTCAACAGGGCTCACGGTACACATGCCTTTGAGTATCCAAGCTTGGACTCTAGGTTCAATCGAGTTTTCAATGATGCAATGATCGATCACACCACTCTAGTTATGAAGAAGATTCTTAAACACTACAAAGGTTTTGAGGGCATAAAAAGGCTTGTGGATGTAGTTGGTGGCCATGGGATTAACTCGAACTTAATCGCTTCCAAATACCCTCATATTGAGGCTATCAATTTTGACTTGCCTCATGTCATACAACATGCCCCTCCCTATCCTGGAGTGGAGCACGTTGGAGGAGATATGTTTGAAAGTGTGCCTAAGGGAAATGCCATCTTTATGAAGGTGAGTGGTGGACTGGATAGGGTATTAGCTCTCTATTTTGTCTAG 849 0.4499 MANIGNSREESEDEEGFSYAMHLVNYTVFPLSLQTATELGVFDVLQKAGPNAKLSAKQIASQLSCNKNPAAPSMLDRILALLASNSVLKCSVSVLQDDEQNLEAFQRLYTITPVASLFARNSDGVSLGPLMALSHDKVFQASWSQLKDAIREGGIPFNRAHGTHAFEYPSLDSRFNRVFNDAMIDHTTLVMKKILKHYKGFEGIKRLVDVVGGHGINSNLIASKYPHIEAINFDLPHVIQHAPPYPGVEHVGGDMFESVPKGNAIFMKVSGGLDRVLALYFV* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3509 282 Pfam Dimerisation domain 32 83 IPR012967 GO:0046983
Lja3g3509 282 SUPERFAMILY "Winged helix" DNA-binding domain 11 121 IPR036390 -
Lja3g3509 282 PANTHER O-METHYLTRANSFERASE 13 269 IPR016461 GO:0008168
Lja3g3509 282 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 282 IPR016461 GO:0008168
Lja3g3509 282 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 268 IPR029063 -
Lja3g3509 282 PANTHER CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE 13 269 - -
Lja3g3509 282 Pfam O-methyltransferase domain 143 268 IPR001077 GO:0008171
Lja3g3509 282 Gene3D - 1 117 IPR036388 -
Lja3g3509 282 Gene3D Vaccinia Virus protein VP39 119 271 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3509 Lja-Chr3 69695169 69697014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3509 13 268 Monolignol Biosynthesis Gene Families AT5G54160 52.734 6.87e-91 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3509 K13066 - gmx:100803633 379.793