Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3504 ATGAAGAAGAAAGATCATGATCATCAAACCTGCATTCGCGTTTTATGTCGACTCGCAATTAACACGCACACTCATCCCACGCGCTCAAATCAATCAATATTAACACACTCACACATTGCTATAACAATTTCTAGGGTTTCCATTCCCAAATCCCAATCGAATTCGAATCGAACAATGTTGCAGCTTCTGTACGGTGCGATTTTCGGTGAAATCTTCATGATTCTGAGCTTCCTATTCAAGACTCCGTTCAGGAAGCTGGTTATCATCACGTTGGATCGGGTCAAGCGAGGTCGCGGTCCTGCTGTAGTCAAAACCGTCGCCGCCACTTTGCTGCTGCTCCTCGCTTCGTCACTCCACAGCGTCTACAAGATCCGCCGTCGCAGTTTCGAAGCTGGTGGCGGTGGCGGTGGCGGTGTCGTTAACCCTACCGATCAAGTGCTTATGTCGAATCACGTTCTCGAAGCTTCTCTTTTAGGTTTTGTTCTGTTCCTTTCTCTGATGATAGATAGATTGCACCATTACATTAGAGAGCTTCGGTTGCTGAGGAGGGCTGTGGAGTCTGCGAAGAAACAAAGCCGAAGCTTCGGTAACGGTATAAATGGCATTGCAACAGAGCAAAACAAGGCCTTGATGGAAGAAATTGCCACATTGAGGTCCAAAGTTAAGGAACTTGAGTCTGAATGTGAGGTGAAAGGAAGCAGGGCTAAGGGCTTGGAAGCTGAGGTTGAGACTCTTAAGAAACAATCTGAAGGGTTCCTTATGGAATATGATCGCCTCTTAGCGGAAAATCAGAATCTTCAGAGTCAATTGTAG 813 0.4637 MKKKDHDHQTCIRVLCRLAINTHTHPTRSNQSILTHSHIAITISRVSIPKSQSNSNRTMLQLLYGAIFGEIFMILSFLFKTPFRKLVIITLDRVKRGRGPAVVKTVAATLLLLLASSLHSVYKIRRRSFEAGGGGGGGVVNPTDQVLMSNHVLEASLLGFVLFLSLMIDRLHHYIRELRLLRRAVESAKKQSRSFGNGINGIATEQNKALMEEIATLRSKVKELESECEVKGSRAKGLEAEVETLKKQSEGFLMEYDRLLAENQNLQSQL* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3504 270 Gene3D - 203 266 - -
Lja3g3504 270 PANTHER BCR-ASSOCIATED PROTEIN, BAP 59 270 IPR008417 GO:0005783|GO:0006886|GO:0016021
Lja3g3504 270 PANTHER B-CELL RECEPTOR-ASSOCIATED 31-LIKE PROTEIN-RELATED 59 270 - -
Lja3g3504 270 Coils Coil 171 191 - -
Lja3g3504 270 Pfam Bap31/Bap29 cytoplasmic coiled-coil domain 220 268 IPR041672 -
Lja3g3504 270 Coils Coil 207 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3504 Lja-Chr3 69656064 69658572 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3504 K14009 - gmx:100790767 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3504 3 69656064 69658572 Lja3g1380 3 14615465 14620078 PCT