Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3494 ATGATTTACATGAAGTTCAAGCTGCCAAAAGAAAACAACACAAATTTCAGTCTCATGTCGGATAGGATGAAGGTTAATACATATCAGAATTACCAATACAGAATAGTAAGAGAGGGAAAAGAAAAAGTCTGGTTGTCGGTTGAGAGACCTTCTTCTTTCCACGGCCACAACGCCGTAGCTCCGACTCCGCTCCGCCGTCCGAAGACTGTTCCTGATCTTCTGTCATACTGGAACCACGCCGGAGGGTCTGCCGAGACAGCCACCGAAGCTGCTCCTGAAGGTGACGGTTCTTGGAAGCCTCGGGCCTGTGCAGGTTCTCATGAGGCCGGAATCTACCGTCGGCGAGCTGGTGGTGGCGCGGCAGTACGTGAAGGAAGCTTGCCGTCCAACGATGCCTCTGATTTCGACCTTCATTACTCGCAGTTTAGCCTAGAAAGTTTGCATAGGGAGGAGAAACTGGTGCAAGATGCTAAGTTTGTGTTTGAGGCAAAGACTATTCTGAAAATGGAGCTTCTGGTTCTGTCCACACTCAAATGGAAGATGTATCCTGTGACTCCACTTTCATTTCTGGATCACATTATCAAAAGGCTTGGATTGAAAACCCACCTTCACTGGGAGTTTCTCAGGCGTTGTGAGCATCTTCTTCTGTCTGTGCTTTTAGATTCAAGATTTGTTGGTGTTCTTCCTTCTGTGTTGGCCACTGCAACAATGCTGCATGTTATAGACCAGATTGAGAAGAGTGATGAGGTGGAATACAAAAAGCAGCTTCTGGGTGTTCTCAAAATTAACAAGGGGAAAGTAGATGAATGCTATGATGCCATGCTTGAGCTTACTAATGCCAATGATTATGATGATAACAAGAAGGTTAATAAGCGCAAGTATGAGGAAATAATCCCTGGTAGCCCAAGTGGCGTCATTGATGCTGCTTTTAACTTTGATGGTTCTAACGATTCGTGGACAGTGGGATCTGATTCTTGCTTTGTCCTGGAAATGTGTCCGAGAGGTTCTTTTCATGAATCAACTTTGGCTTCCAGTGACGTGGAATTTCATAGTCCAACATTAAAAAATATCATGGAAACTGACAATGAAGTATTTCAAGAATCAAAACAGTGGGAGCAAGAAAGTAGATATATCTCACAAAAACAAATGGAGTCTCTTGCTGGTGTTATGGATGAGGAGGTGATTGACATCATAACAATGGAGGATGTTATGGAGGAACTATTACAGTTGTTCGAAACCCTTGAGTGTGTGGCGGTTTAA 1260 0.4421 MIYMKFKLPKENNTNFSLMSDRMKVNTYQNYQYRIVREGKEKVWLSVERPSSFHGHNAVAPTPLRRPKTVPDLLSYWNHAGGSAETATEAAPEGDGSWKPRACAGSHEAGIYRRRAGGGAAVREGSLPSNDASDFDLHYSQFSLESLHREEKLVQDAKFVFEAKTILKMELLVLSTLKWKMYPVTPLSFLDHIIKRLGLKTHLHWEFLRRCEHLLLSVLLDSRFVGVLPSVLATATMLHVIDQIEKSDEVEYKKQLLGVLKINKGKVDECYDAMLELTNANDYDDNKKVNKRKYEEIIPGSPSGVIDAAFNFDGSNDSWTVGSDSCFVLEMCPRGSFHESTLASSDVEFHSPTLKNIMETDNEVFQESKQWEQESRYISQKQMESLAGVMDEEVIDIITMEDVMEELLQLFETLECVAV* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3494 419 PANTHER CYCLINS 153 320 IPR039361 -
Lja3g3494 419 Pfam Cyclin, C-terminal domain 184 295 IPR004367 -
Lja3g3494 419 SMART Cyclin_C_2 184 303 IPR004367 -
Lja3g3494 419 Gene3D - 151 182 - -
Lja3g3494 419 Gene3D - 183 273 - -
Lja3g3494 419 SUPERFAMILY Cyclin-like 165 279 IPR036915 -
Lja3g3494 419 PANTHER CYCLIN D3.1 PROTEIN 153 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3494 Lja-Chr3 68988748 68993166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3494 154 319 Core Cell Cycle Gene Families AT5G67260 49.398 4.51e-47 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3494 K14505 - lja:Lj1g3v0913090.1 298.13