Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3477 ATGGAAATGGGAGGACAGAGTTGCTTCAAGGTTTTGATTGTGTGTCTTTTGGCATTGATTGCATCAAATCATGCTCAATTAGAGCAGGGTTTTTATACAAAAACCTGCCCAAAAGCTGAGAAGATCATTTTAGACTTTGTTCATGAACATATCCACAATGCTCCATCACTTGCAGCTGCATTAATAAGAATGAACTTTCATGACTGTTTTGTCAGGGGATGTGATGCATCAATCCTTCTGAACTCAACTTCCAAACAGGCTGAAAGGGATGCTCCTCCAAATCTTACAGTTAGAGGGTTTGACTTCATTGACAGAATCAAGAGCCTTGTTGAAGCTCAATGCCCTGGTGTTGTCTCTTGTGCTGACATAATTGCTTTGGCTGCAAGAGACTCAATTGTAGCCACTGGAGGCCCCTTTTGGAAAGTTCCAACAGGTAGAAGGGACGGTGTCATCTCTAACTTGGTAGAAGCCAGAAGCCAAATTCCTGCTCCAACTTCCAACTTCACCACCCTCCAAACACTCTTTGGCAATCAGGGACTTGATTTAAAAGACTTGGTCCTCCTCTCTGGTGCTCACACAATTGGCGTGTCCCATTGCTCATCACTCTCAAACCGTTTGTTCAATTTCACTGGTAAGGGTGATCAAGACCCATCACTTGACAGTGAATATGCAACAAATCTCAAGACCTTTAAGTGCAAGAACATCAATGACAACACCACAAAGATTGAGATGGACCCCGGAAGTCGCAAAACATTCGATCTTAGTTACTATGGTCACTTAATCAAGAGAAGGGGCTTATTTGAGTCTGATGCTGCATTGTTGACAAACTCTGTTACAAAATCTGAGGTCATACAACTGCTTCAGGGGTCACTTGCAAATTTCTTTGCTGAATTTGCCAAATCTATGGAGAAACTGAGTCAAGTTAAAGTGAAAACTGGGACAGAAGGAGAGATCAGGAAGCATTGTGCAGTAGTAAATAGCTAA 984 0.4228 MEMGGQSCFKVLIVCLLALIASNHAQLEQGFYTKTCPKAEKIILDFVHEHIHNAPSLAAALIRMNFHDCFVRGCDASILLNSTSKQAERDAPPNLTVRGFDFIDRIKSLVEAQCPGVVSCADIIALAARDSIVATGGPFWKVPTGRRDGVISNLVEARSQIPAPTSNFTTLQTLFGNQGLDLKDLVLLSGAHTIGVSHCSSLSNRLFNFTGKGDQDPSLDSEYATNLKTFKCKNINDNTTKIEMDPGSRKTFDLSYYGHLIKRRGLFESDAALLTNSVTKSEVIQLLQGSLANFFAEFAKSMEKLSQVKVKTGTEGEIRKHCAVVNS* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3477 327 Gene3D - 31 326 - -
Lja3g3477 327 PANTHER PEROXIDASE 25-RELATED 5 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3477 327 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3477 327 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3477 327 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3477 327 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3477 327 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3477 327 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3477 327 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3477 327 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3477 327 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3477 327 ProSiteProfiles Plant heme peroxidase family profile. 26 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3477 327 Gene3D Peroxidase, domain 2 162 305 - -
Lja3g3477 327 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Lja3g3477 327 CDD secretory_peroxidase 26 325 IPR033905 GO:0004601|GO:0042744
Lja3g3477 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Lja3g3477 327 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3477 327 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3477 327 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3477 327 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3477 327 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3477 327 PANTHER PEROXIDASE 5 326 - -
Lja3g3477 327 Pfam Peroxidase 45 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3477 327 SUPERFAMILY Heme-dependent peroxidases 26 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3477 Lja-Chr3 68415566 68417581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3477 16 327 Peroxidase AT1G05260 68.910 1.58e-167 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3477 K00430 - gmx:100803114 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3477 3 68415566 68417581 Lja3g3477 3 68415566 68417581 ECH
Lja3g3477 3 68415566 68417581 Lja3g1104 3 11495109 11498064 PCT