Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3470 ATGTGCAAAGGTGCAGAAGCAAGCAAACATGGTGATTTCTGCAACAATTTCCCACCAAAAGAGAGTGATTCACCTGGTGCAACTAGAAGTTCTAAATGTTGTGAGCTATGTGGGTTAGAGGCTTCATTGTATTGCCAAGCTGATGATGCATATTTATGTAAAGAATGTGATAAATGGGTTCATGGAGCAAATATTTTGGCCTTCAGGCACATTAGGTGTTTTCTCTGCAACAAATGCCAGAATCTTACAAGAAGATATCTCATTGGAGCCTCAATAGAGCTTGTTCTTCCTGCCAACATAAGCTGGGCCTTAGGAAATCTTCCTAACAACAGCAGCAAAAGAAAATGTTCAAGATTGCATCACAGCTAG 369 0.4038 MCKGAEASKHGDFCNNFPPKESDSPGATRSSKCCELCGLEASLYCQADDAYLCKECDKWVHGANILAFRHIRCFLCNKCQNLTRRYLIGASIELVLPANISWALGNLPNNSSKRKCSRLHHS* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3470 122 CDD Bbox1_BBX-like 33 75 - -
Lja3g3470 122 PANTHER B-BOX ZINC FINGER PROTEIN 29 18 98 - -
Lja3g3470 122 SMART bboxneu5 29 75 IPR000315 GO:0008270
Lja3g3470 122 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 18 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3470 Lja-Chr3 68357832 68358712 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3470 15 113 C2C2-CO-like Transcription Factor Family AT3G21890 45.283 3.87e-24 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3470 - - gmx:100500322 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3470 3 68357832 68358712 Lja3g3470 3 68357832 68358712 ECH