Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3469 ATGGCTTCCTCAAAGCTCTTCACAGTTGTTCTCTTAGCTCTCTTTCTCCAAACATCTTTTGGAGCCAATCCTCTCTACCATATCTGTTCAAACACTGATAATTTCACAGACCAAAGCCCATATGAATCAAACCTGAAAATTCTGATGAACTCACTCATCTACAAGACCCCTTCATCAGGCTTTGGTGTTGGGTCAGTGGGCCAATATCAAACCCAACAAGCCCATGGGCTCGCTCTCTGCCGTGGCGATGCAACCACAGAAATCCTCAGCCTATGTCCTCACAACAAAGGTGCTATTATATGGTATGACAATTGCATGTTCAAGTATTTGCACACTGATTTTTTTGGCAAAATTGACAACACAAACAAGTTCTCTTTGTTGAATGTGCAAAATGTTACTGATCCTAGCACATTTAACTACATGGTCAAGGACTTACTGAGCCTACTTTCCTATAAAGCTTCCATGGACACAAAATTTTATGCTGAAGGAGAGCTAAAGATTAATGGAGAATCAGATAAAATTTATGGGTTAACTCAGTGCACCAGAGACCTTTCTAGCGTTGATTGCAAGAAGTGTCTTGATAATGCAATTGGTGAACTTCCAAATTGTTGTGATGGGAAAAAAGGAGGCAGGGTTGTTGGTGGAAGCTGCAACATTAGATATGAAATTTACTCATTTGTTAGGGAGTAG 690 0.4043 MASSKLFTVVLLALFLQTSFGANPLYHICSNTDNFTDQSPYESNLKILMNSLIYKTPSSGFGVGSVGQYQTQQAHGLALCRGDATTEILSLCPHNKGAIIWYDNCMFKYLHTDFFGKIDNTNKFSLLNVQNVTDPSTFNYMVKDLLSLLSYKASMDTKFYAEGELKINGESDKIYGLTQCTRDLSSVDCKKCLDNAIGELPNCCDGKKGGRVVGGSCNIRYEIYSFVRE* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3469 229 Pfam Salt stress response/antifungal 29 109 IPR002902 -
Lja3g3469 229 Pfam Salt stress response/antifungal 130 223 IPR002902 -
Lja3g3469 229 Gene3D - 120 226 IPR038408 -
Lja3g3469 229 Gene3D - 22 114 IPR038408 -
Lja3g3469 229 ProSiteProfiles Gnk2-homologous domain profile. 120 226 IPR002902 -
Lja3g3469 229 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 3 228 - -
Lja3g3469 229 PANTHER DOMAIN-CONTAINING PROTEIN 2, PUTATIVE-RELATED 3 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3469 Lja-Chr3 68352012 68352737 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3469 25 228 Pollen Coat Proteome AT4G20670 38.667 3.37e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3469 - - lja:Lj3g3v1353730.1 371.318