Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3467 ATGGCTTCTTCAAAGCCCTTCACAGTTGTTCTCTTAGCTCTCTTTCTCCAAACATGTTTTGCAACTGACCCACTCTTCCATTTCTGTTCAAACTCGGGTGAGAATTTCACGACCCAAAGCCCATATGAATCAAACCTGAAAACCCTCATAAACTCCCTCATATACAAAACCCCTTCAACAGGCTTCGGCGTCGCGTCAGCGGGCCAGCCCCAAGCCCAACAGCAAGTCAACGGGCTGGCCCTCTGCCGCGAAATCCGCAACCGCTGTCCTTACAACAAAGGTGCAATCATATGGTACGATAATTGCTTGTTCAAATACTCAGACACTGATTTCTTCGGGAAAATCGACACTGCAAACAGGTTCTACATGTGGAACTTGAAGAATGTCAGTGACCCTGAAACGTTTAACTACAAGACTAAAGGGTTGTTGAGCGAGCTTGCAGGTAAGGCTTCTTCGAATCCGAAGTTGTATGCGACTGGGGAAATGGAGCTTGAGAAATCGGTGAAACTTTATGGGTTGACTCAGTGTACTAGAGATTTGTCTAGTGGTGATTGTAAGAAGTGTCTTGATGATGCCATTAACGAGCTTCCGAATTGTTGTGATGGGAAAGAAGGTGGGAGAGTTGTGGGTGGAAGCTGCAACTTTAGATATGAGATATACCCATTTGTCAATGAATGA 678 0.4543 MASSKPFTVVLLALFLQTCFATDPLFHFCSNSGENFTTQSPYESNLKTLINSLIYKTPSTGFGVASAGQPQAQQQVNGLALCREIRNRCPYNKGAIIWYDNCLFKYSDTDFFGKIDTANRFYMWNLKNVSDPETFNYKTKGLLSELAGKASSNPKLYATGEMELEKSVKLYGLTQCTRDLSSGDCKKCLDDAINELPNCCDGKEGGRVVGGSCNFRYEIYPFVNE* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3467 225 ProSiteProfiles Gnk2-homologous domain profile. 117 222 IPR002902 -
Lja3g3467 225 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38 13 225 - -
Lja3g3467 225 Gene3D - 22 111 IPR038408 -
Lja3g3467 225 Gene3D - 116 222 IPR038408 -
Lja3g3467 225 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 13 225 - -
Lja3g3467 225 Pfam Salt stress response/antifungal 29 108 IPR002902 -
Lja3g3467 225 Pfam Salt stress response/antifungal 128 219 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3467 Lja-Chr3 68339193 68339921 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3467 25 223 Pollen Coat Proteome AT4G20670 39.474 1.30e-44 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3467 - - gmx:100527155 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3467 3 68339193 68339921 Lja3g3467 3 68339193 68339921 ECH