Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3460 ATGGAATTGACAAGACCTAGTTATGCCGTTGTTCTTGTAATTCTTCTTTGTGCCTTGGCTGAAAGGGGCTCAGATGGGAAGAGATGGAAAGCTGAGGAATTTTATACAGATCATGCAGAGCAGGTGTGGAAACATTGCAGGAAAGAATTGATAGAGAGGAATAATGATAGTAAAGATTTTGACTTGCATCTATTGGATGAAAGTGGTGACTTGCATCTATTGGCAGATATATCAACTCTTTCAATAGAAAATGATATAAATGAAGCAGCTAAATATCTGCCACCCCATATGAAGCAATACTTTTTGGATTGCATGAGAAACAAGAATCCTCCTACTCCTGTTTCAGAAGAGCAGAGAAATAGGCTGAAGAAGCATTATATGTCACTCTTTGGTTTAGCAAGTGGTCATAGATATTTGCTCTCCGAGACACCACCATCAGGTTCTAATTTTGTTCCATCATCACCAGCAGCCAATTCTCCACCTCCAAGTCCAAAGCTTCCGTATGACCCACTCATTCAAGACTTTTTTGTGCCATCTCCACCACCTCCTCCTTCTCCACCAGTTGATCCCCAGCATGATAATAACAAACAAAAGAAAGCACTTATTATTGCTGCTGCTGCATCAGGACTTATAATCTTAATAGGCTTGCTCCTCTGCTATTTTGAGGTCAGGAGGAGGAAAAGAGTTGACAAAGGTGACAGGGATTTACTCATAGTAAGCTCAAGTGATTTGTCTAATGGTTCAGAAAAGTCTGTTGGTTTGGAAAATTCTGATATGCAAGAAGCTGGGATTAACTATGGAAAGAACCCTACTCTTGTTAGGAATTTGTCCATTAAGTCTGAAGACCGCAATGCCTCAATGGATGAGATAACATCATCAGATGACAAGGGACAAGTACAGTTGTCAATATTAAAACCTCCTCCGGGAAGATCAGCCCCGGAGCCTCCACGACCGCCACCGCCACCTGGTCCTAGGCCTCAGCCTCCACCTCCTCCAAAAGTAGCTCAGCCCCCACCTCCTCCAAAAGTAGCTCAGCCTCCACCTGCTCCTCCCAAACCAGTGGCAGGGAGATATCAACCTTCACCTTTAGGACCACTACGTTCTGGTGAGGGTGCTGAATCCGATGCTCCAAAACCGAAACTGAAGCCATTTTTCTGGGATAAGGTTGCTGCAAATCCTGATCAAGCAATGGTCTGGCATGAGATCAGAGCAGGGTCATTCCAGTTCAGTGAAGAAAAGATAGAATCCTTATTTGGCTGTGCCAACCAGAACAGAAATGAAAGAAGAAAAGAATCTCCATTTGTGGAATCTTCTGTTCAGTACATTCAGATTATTGACCCCAAGAAAGCACAAAATTTATCAATTCTTTTACGTGCTTTAAATGTGACACCAGAAGTAGTTATTGACGCCCTAAAAGAAGGTAGTGAGATTCCTGTTGAGCTCATCCAGACATTATTGAAGATGGCGCCAACGACAGACGAGGAACAGAAGCTAAGGTTATTCACGGGCGACCTCTCTCAACTTGGGCCTGCAGAGAGGTTTCTCAAGGCCTTGGTTGATATTCCATTAGCTTTCAAACGTCTTGAATCTCTATTGTTCATGTTTACACTTCCAGAAGAGGCCTCAAGCATTAAGGAGTGTTTTTCAACATTAGAGGTTTCTTGCAACAAACTAAGAAAAAGCAGGCTCTTCCTAAAGCTATTAGAAGCAGTTCTCAAGACTGGAAACCGCATGAATGATGGCACCTACCGCGGTGGTGCTCACGCATTTAGGCTCGACACACTTTTGAAACTTGCAGATGTAAAAGGAACAGACGGCAAGACCACACTACTGCACTTTGTGGTTCAGGAGATTATACTTTATGAGGGCAAAAGAGCTGTGAGAACAGCAAAAGCAAGTGGAAGCCATTCAGGTATCAAAACTGAGGATTTCATTGAGGATTCAAATGGAGAATCAGAAGAGGACTATCGCAGCCTTGGCCTTCAGGTTGTTTCAGGTCTAAGTAGTGAACTTGAAGATGTGAAAAAAGCAGCAGTTATAGATGGTGATGCACTAACAGCTGCAGTGTTGAAACTTAGTCATTTATTAGCAAAAAATGAAGACTTGCTGAATACTGATCTGAAGAATCTCCAAGAAGAGAGTGAGTTCCAACATTCCCTTACAAGTTTTGTGGAGAAAGCAAAAGCAGATGTGTCATGTCTGATAGAGGAGGAGAAGAGGATAATGGCTGAGGTTAAGAGCACAGCAGATTATTTCCATGGGAATGCAGGGAAAGATGAAGGGTTGCGTTTGTTTGTGATTGTTCGCGATTTCTTGATAATGTTGGACAAGGTATGCAAAGAGGTGAAAGACACAACAATGAAGACGAGGAAGGCTTCTGCCAAGAAAGAGGCTTCATCTGTGTCATCCTCACCAGAGACTAGTCATCATTCACCTTCTGATATGCATAAGCGACTGTTTCCGGCCATTGCAGAACGGAGAGTGCATGACTTTAGTTCAGATGATGATGATGATTGGAGCTTACAGACGTAG 2532 0.4297 MELTRPSYAVVLVILLCALAERGSDGKRWKAEEFYTDHAEQVWKHCRKELIERNNDSKDFDLHLLDESGDLHLLADISTLSIENDINEAAKYLPPHMKQYFLDCMRNKNPPTPVSEEQRNRLKKHYMSLFGLASGHRYLLSETPPSGSNFVPSSPAANSPPPSPKLPYDPLIQDFFVPSPPPPPSPPVDPQHDNNKQKKALIIAAAASGLIILIGLLLCYFEVRRRKRVDKGDRDLLIVSSSDLSNGSEKSVGLENSDMQEAGINYGKNPTLVRNLSIKSEDRNASMDEITSSDDKGQVQLSILKPPPGRSAPEPPRPPPPPGPRPQPPPPPKVAQPPPPPKVAQPPPAPPKPVAGRYQPSPLGPLRSGEGAESDAPKPKLKPFFWDKVAANPDQAMVWHEIRAGSFQFSEEKIESLFGCANQNRNERRKESPFVESSVQYIQIIDPKKAQNLSILLRALNVTPEVVIDALKEGSEIPVELIQTLLKMAPTTDEEQKLRLFTGDLSQLGPAERFLKALVDIPLAFKRLESLLFMFTLPEEASSIKECFSTLEVSCNKLRKSRLFLKLLEAVLKTGNRMNDGTYRGGAHAFRLDTLLKLADVKGTDGKTTLLHFVVQEIILYEGKRAVRTAKASGSHSGIKTEDFIEDSNGESEEDYRSLGLQVVSGLSSELEDVKKAAVIDGDALTAAVLKLSHLLAKNEDLLNTDLKNLQEESEFQHSLTSFVEKAKADVSCLIEEEKRIMAEVKSTADYFHGNAGKDEGLRLFVIVRDFLIMLDKVCKEVKDTTMKTRKASAKKEASSVSSSPETSHHSPSDMHKRLFPAIAERRVHDFSSDDDDDWSLQT* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3460 843 PANTHER FORMIN-RELATED 1 838 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lja3g3460 843 MobiDBLite consensus disorder prediction 155 190 - -
Lja3g3460 843 Pfam Formin Homology 2 Domain 373 775 IPR015425 -
Lja3g3460 843 MobiDBLite consensus disorder prediction 308 358 - -
Lja3g3460 843 MobiDBLite consensus disorder prediction 786 819 - -
Lja3g3460 843 SMART it6_source 371 790 IPR015425 -
Lja3g3460 843 Gene3D Formin, FH2 domain 377 809 IPR042201 -
Lja3g3460 843 SUPERFAMILY Formin homology 2 domain (FH2 domain) 440 798 - -
Lja3g3460 843 MobiDBLite consensus disorder prediction 288 379 - -
Lja3g3460 843 ProSiteProfiles Formin homology-2 (FH2) domain profile. 371 801 IPR015425 -
Lja3g3460 843 PANTHER FORMIN-LIKE PROTEIN 1 838 - -
Lja3g3460 843 MobiDBLite consensus disorder prediction 144 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3460 Lja-Chr3 68285070 68289065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3460 348 828 FH2 protein (formin) Gene Family AT5G54650 62.190 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3460 - - lja:Lj3g3v2888350.1 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3460 3 68285070 68289065 Lja3g3460 3 68285070 68289065 ECH