Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3456 ATGGGCGATGGGGGAGTCGCATGCATGCCTTTGCAGTATATTATGGACAGGTTACCAGAGAAGACGCATTGCGGAGGCAAGAGTGGGAATAATAATAACAATGGCTTCAATTCCAAGTTGTTTAAGTTTGCTGACAGCGACAGGAAGACGATGAAGGGTAGGAAAGACGAGCCGGCAGCAGTGAGGAAGAGTGAGTTGGGGTTGGACAGAGTGAGCAAGAGGAGCAGCAACGATTACGACTGTGAGAATGTGCAGAAGGAGGAAGTGGAAGAGGGTGAGTTGGGAACTTTGAAGTGGCCAGGGGCAGGGACTGACCTTGAGAATGGTGAGTTCGTGCCGGAGAACGGGGAGATTGTCGGTGATAGATGGAAAACAGGGGAGATGGAGAAGGGGGAGATTCATTCTGGGAATTGGAGGAAAGAGGACGTCGAAAGAGGGGAGATAACACCTGAGAAGGGTAGGAGAGGAGAAGCTGACAGAGATGAATATGGGTCGTGGAGAGGTATGGTGGATGACATCGAGAAGGGAGAATTCATTCCAGATAGGTGGTATAAGGGAGACATGGGCAGGGACGATTACGGAAGCAATAGAGCCCGCAGGTTTCGTCCAGGGAGGGGCAGGGGAAGGGGGCGGAAAATTGAACGCGAACGTACACCCCCTCCCGCCAGATATGCAAGTGATGACTTTTTCCGAAAGAATGAAGTCAACAGAAGTGGGGGTCAGCATGCTAGAAATTCTCCCAGGTGGGAGAGTGGACAACAGAGGAATATAAGGATCAGCTCAAAGATTGTTGATGATGAGAAAAATGTACACAGCAACGGTAAGGACCATGCCCAAGATTACACTTCTGGTAGTCGCATGAAGAGGCTCGGCAATGATTCTGACATCTCTGACTGGAAGCATTCTGCTGAGTTTTCTGGTTCTAAAAGCAGAAGGCTTTCTGATGATACCTATCGCCATGTTCACTCAGAGAACTTCTCTCGTCACTCGGTGGAGAGGTCTTACAGAAATAGTAATTCTAAAAAAGTTTCTGCAGATAAGTTTTCTTCCAGAAATCACGAATCTTCTTTATCTGCCAGACCAGCAGCTTATGACAGGCATGGGCGCAGCCCTGTTCATTCTGAGCGGTCCCCGCGAGACCGAGGCAGGTATTATGAGCATAGAGATTATGATCATAGAGATCGCGATCGCACTCCGGTGCGTCGATCCCCCTGTGGTCGTGATAAATCTCCATATAGCAGGGAGAAATCCCCCCATGGCCGGGAGAGGTCCCCATATACGAGGAACTGGGATAGAAGTCGTCAGCATGATCATAAATTGAGAAGTCCAGCACGTGCTGAGCACTCGCCACAAGATCGAGGTTGGCGTCATGCTCGAAGGGATCGGACTCCAAATTTAGTAGACGGATCCCCCCTTGATCGGACTAGGAAAGACATTCATCAAGAAACAAGTTGTAAAGCCTTATCAAGTGAAAAATACAACTCCCCAAGTAGTTATAAGGATCATGAAGATAAGCACATTCAAAGGGAGTCAAATTGTTCAGGTACTGAATCTCAAGGTGAAGAAAGAAATGTGCAAAGTACCAATGAGGCTATTGAGAACGAAACCTTCAGTGAACTTGTAAAGGAACAGAAGTCCAGCAGCCCAACTGTTAGCTACAAAGAATCCCCTCGCCTTGAGCCTCCTCCTGAGGATCTGCCTTCAATGGAAGAAGATATGGACATTTGTGATACCCCTCCACACGTCCCTGTGGTGACAGATTTGTCATCAGGGAAATGGTTTTACCTTGATCATGTAGGTGTAGAAAATGGTCCTGCCAAATTGTGTGACATCAAGGTCCTTGTTGATGAAGGGGTACTAACGTCAGATCACTTTATCAAGCATTTAGATAGTGATAGGTGGTTAACCGTTGAAAATGCAGTGTCACCATTGGCAGCTCAGAGTTTTCCGTCAATTGTGTCTGAGACCGTAACTGAGCTGGTAAGTCCTCCAGAAGCTCCGGGTAATCTTTTGGCAGATACTGCAGATATTGTTCAATCTGGTCCTGAGAATTACACAGAAATGCCGGCCTCCTCACTACATCCACTGATATGCCCTAACGACAGTGTGTTTATACCTGAACATTTTGACGACACTCTCATTGATGAAAGAGTTAGAAATCTGTTAGAGGGTTATGATGTCATTCCTGGGATGGAACTTGAGGCAATAAAAGAAGCTTTGCAAATGAATTTTGAATATTCAAAAGGGGAGGGTTTAAGAGACTATGAAGGTTTCCCTTGGCTTGTTTCCTGCCTTAGTGATGATAGTCATCCCTGTACTGATTTAGCATCAAGAGATTCTGAATCTCAGTTAAGTATGCCGTGTGGCAACGATAATGGATTTGCCTTTGGTGTTTCTAGTGACTGGTTTTCCACCCGTTGGCCATGCAAAGGTGGTGACTGGAAAAGGAATGAAGATGCCCAAGATAGATATTCCAGGAAGAAACTTGTCTTAAATAATGGTTTTCCATTATGTCAAATGCCAAAGTCTGGATGTGAAGATCCTCGTTGGCCTCATAAAGATGATTTGTATTTGCCATCTCAAAACAGCAGGCTTGATCTCCCTCTATGGGCTTTTTGTGCTGATGAGCGGGTTGATTGCAGTCCTGTGAGCAGATCAGTTCAAATCAAGCCTGCTTCTGTGAGAGGAGTGAAAGGAAATGTTCTTTCAGTGGTAAGGATAAATGCGTGCGTAGTCAAAGACCAGGGATTATTGGTCTCTGAGTCACGCCTCAAGACCCGAGGCAAGGATAGACATCATTCAAGGTCAACTCGGCATTTCTCGTCAACCGGTGATAGTAAGAGATCATCAACTGAAGAAGATTCTCTGTCAAAAGCTGCTAGTGATCAAGGTTCCTGGCAGAGCAAGAAGTTCATTAGCATCCCTAAAGACCATCTCTGTACTGTCCATGAGTTACAGTTAAATTTGGGCGACTGGTATTATCTTGATGGTTCTGGGCGTGAAAGAGGGCCCTCATCATTTTCAGAGCTACAATATTTAGTTGATAAAGGAATTATAAAGAAGCATAGCAGTGTGTTCAGGAAAAGTGATAAACTCTGGATTCCTGTTACCTCTGCCACAGAAACTTCTGATGTTAGTCTCACAAGCCAGCAAAAAAACAGTTCAACTTCTGGTGCATGCTCTGGACTTCCATCAAAGCAAACCCAAGGTTTTTCATACGGCGAGCCTTACACAAATTCAAGTTTGTTTAACAGCATACACCCTCAGTTTTCTGGTTATACTCGCGGAAAGCTACATGAATTGGTTATGAAATCATTTAAGAGTCGAGAGTTTGCCGCGGCTATAAATGAGGTTTTAGATCCCTGGATCAATGCAAGGCAACCAAAGAAAGAAATGGAGAGACAAATATATTGGAAATCAGAAGGTGATGTGCGTGCTTCCAAAAGAGCCCGGATGCTGATTGATGATAGTGAAGAAGATAGTGAGTTGGACGATGGTGATGTTACTATTGAGAAGGATGAGCCCACTTTTGAGGAACTATGTGGTGATGTTACTTTCCCTGAACAAAAAATTGGGATTACTGATTCAGATGTGCGAAGCTGGGGCTTATTGGATGGTCGTATTTTGGCACGAATTTTCCATTTTTTGAGATCTGATTTGAAGTCCCTTGTCTATGCATCAATGACTTGCAAGCATTGGAGTGCTGCTGGATGGTTTTATAAAGAAGTTACAATGCAGGTCAATTTGTCATCCTTGGGTCATTCCTGCACTGATACCATGCTGTGGAACATCATGAATGCTTATGAGAAAGACAAGATTAATTCTATAATTCTAATGGGCTGTGTCAATATTACGGCTGACATGCTGGAGAAAATCCTTCTTTCATTTCCTGCTTTATGTACAATAGACATTAGAGGGTGCAGCCAGTTTGGAGAGCTAACTTCTAAATTTGCCAGTGTGAAATGGATCAAGAGCCGAACTTCGCGCATGACTAGAATTGGTGACGAGCCTCATAAAATAAGAAGCCTTAAACATATTACAGAGCAAACTTCATCTGTTTCTAAATCTAGCAATTTAGATATAGATGAGTTTGGGCAATTGAAGGATTATTTTGATAGTGTGGATAAGCGAGACGCATTATTCCGTCAAAACTTATACAAGCGATCCAAATTATATGATGCTAGACGGTCCTCCTCCATTCTGTCTAGAGATGCTCGTACAAGACGTTGGGCAATTAAGAAATCTGAAAGTGGTTTTAAGAGGATGGAGGAATTCCTTGCTTCAAGGCTAAAAGAAATTATGAAGACTAACTCCTGTGACTTTTTTGTGCCCAAGGTTGCCGAAATTGAGGCTAAAATGAAAACTGGCTATTATAGTAGCCGTGGGTTGAGCTCTGTCAAAGAGGACATAAGTAGAATGTGCCGTGATGCAATAAAAACAAAGAATCGGGGTGATGCTGGTGACATGAATCATATTATCACTTTATTTATCCAGCTTGCAACACGGCTGGAAGAGAGTTCTAAGCCTGTGCAGGACAGAGATGTGCTACTGAAGTCGTGGGACAATTCCTCAAAGTATAAGAAGAATAGATCAGTGAATGAAAGGAGGTATAGAAATAATGGAACACACAGTGGTTTGGATAATGTAGAGTATACCTCTGATCGAGAAATCAGGAGGCGCTTATCAAAGTTGAATAAGAAATCTGTTGATTCAGAGAGTGAAACATCTGATGACTTTGATAGGTCTTATGAAGATGGCAACAGTGACAGTGATACAACCACCACCAACACTGAAAGTGATCAAGAAGTACATTCAGAAAGTCTTACCAGGGAGTCAAGAGGGAATAAATACTTCACACCTGAGGAAGAGTTGGATTTTATAACTGATGACCGCGAGTGGGGTGCTCGCATGACGAAAGCAAGTCTAGTTCCTCCAGTTACCAGGAAATATGAAGTCATTGATCAATATGTCATTGTAGCTGATGAAGAGGATGTGCGTAGGAAGATGCGGGTTTCATTACCTGATGACTATGCTGAGAAGCTGATTGCGCAAAAGAATGGCACTGAGGAGTCAGATATGGAACTTCCTGAAGTAAAAAATTTCAAACCTAGAAAGCAGCTTGGAAATGAGGTTATTGAGCAAGAAGTTTATGGAATTGATCCTTATACCCATAATCTTTTGCTTGATTCTATGCCGGAGGAGTTTGATTGGTCTCTGCAGGAGAAGCATTTATTTATAGAAGACATACTCCTTCGAGCGTTGAATAAGCAAGTTAGGAGTTTTACTGGAACTGGAAGCACTCCGATGAGCTACCCTTTGCAGCCTGTTCTTGAAGAAATCAAAAGATGTGCTGAGGAGGACTATGATGCAACAACAATCCGAATGTGTCAAGGTATCCTAAAGGCCATTGACAATCGTCCAGATGACAAATATGTAGCTTATAGAAAGGGGCTTGGTGTTGTTTGCGACAAGGAAAAAGGCTTTGACCAAGATGATTTTGTTGTGGAGTTTCTGGGTGAGGTTTATCCTGTGTGGAAGTGGTTTGAGAAACAAGATGGGATTCGATCTCTGCAGAAAGATAGTAAAGATCCAGCACCAGAGTTCTATAACATCTACCTTGAGAGGCCAAAGGGTGATGCTGATGGATATGACTTAGTTGTTGTTGATGCTATGCACAAGGCCAATTATGCCAGTCGGATATGTCATTCTTGCCGACCTAACTGTGAAGCCAAAGTTACAGCTGTTGATGGTCAATACCAAATTGGTATTTATAGTGTTCGTAAAATTCAACATGGTGAGGAGATCACTTTTGATTATAATTCTGTTACAGAGAGCAAGGAGGAGTATGAAGCATCGGTCTGTTTGTGTGGAAGCCAAGTATGCCGGGGTAGCTATCTGAATCTGACTGGTGAAGGGGCTTTTGAAAAGGTTCTGAAGGACTCACATGGGATTCTTTATCGTCATTATTTGATGCTAGAAGCTTGTGAGTTAAATTGCGTGTCTGAGGACGACTATAATGATCTAGGAAGAGCTGGTTTAGGCCGTTGTTTGCTTGGAGGCCTTCCAGATTGGCTTGTTGCTTATGCAGCTCGCCTTGTGAGATTCATCAATTTTGAAAGAACTAGACTTCCTGAGGAAATTCTAAAGCATAATCTGGAAGAAAAACGGAAATATTTTTCAGAGATATGTCTTGACGTTGAAAAGAGTGATGCTGAAGTTCAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATCTTGCTGTCACTCTCGATAAGGTAAGGTATGTTATGAGATGTATATTTGGTGATCCACGGAAAGCACCACCTCCTCTTGAGAAGCTCAGTCCTGAAGCAATTGTTTCCTATCTCTGGAAAGGAGAGGGTTCATTTGTTGAGGACCTTCTTCAGTGCATAGCTCCTCATGTGGAGGAAGATATGTTGAATGATCTCAAGTCCAGAATTCATGCTCGTGATCCTTCTAGTTCTGCAGATATTCAAAAAGAGCTTCAGAAATCCCTTTTATGGTTGAGGGATGAGGTCCGAAATCTTTCCTGTGCATATAAATGTCGGCATGATGCTGCTGCTGACTTAATTCATATTTACGCATATACCAAGTATTTCTTTAGAATACGGGATTATCAAACGATTACTTCCCCACCTGTTTATATTAGTCCACTTGACTTAGGTCCGAAATACACTAACAAGTTGGGAGCAGAATTTCAGGAGTATCGAAAGACATATGGTGAAAATTATTGTTTAGGGCAGCTCATGTTTTGGCATAATCAGAGTTATTCAAATCCAGATCGCTGCCTGGCAAGAGCCAGTAGGGGTTGTTTGTCTTTACCAGACATCAATTCCTTTTACACCAAGGCTCAGGAGCCATCAGGGCACCGGGTTTATGGTCCAAGGACTGTCAGATCTATGCTGGCAAGAATGGAGAAGCAGCCCCAGAGATCTTGGCCTAAAGACCAAATATGGTCATTCAGAAGTAGTCCGATATTCTTTGGTAGCCCAATGTTAGATGCTGTAATAAATAACTCCTCACTGGACAGGGAGATGGTTCATTGGCTGAAGCACAGACCTGATGTTCCAGGCCATGGTGGACTATTAAATTTTGGGAAGGGGACGGAGCGTACCCGTTGA 7143 0.4333 MGDGGVACMPLQYIMDRLPEKTHCGGKSGNNNNNGFNSKLFKFADSDRKTMKGRKDEPAAVRKSELGLDRVSKRSSNDYDCENVQKEEVEEGELGTLKWPGAGTDLENGEFVPENGEIVGDRWKTGEMEKGEIHSGNWRKEDVERGEITPEKGRRGEADRDEYGSWRGMVDDIEKGEFIPDRWYKGDMGRDDYGSNRARRFRPGRGRGRGRKIERERTPPPARYASDDFFRKNEVNRSGGQHARNSPRWESGQQRNIRISSKIVDDEKNVHSNGKDHAQDYTSGSRMKRLGNDSDISDWKHSAEFSGSKSRRLSDDTYRHVHSENFSRHSVERSYRNSNSKKVSADKFSSRNHESSLSARPAAYDRHGRSPVHSERSPRDRGRYYEHRDYDHRDRDRTPVRRSPCGRDKSPYSREKSPHGRERSPYTRNWDRSRQHDHKLRSPARAEHSPQDRGWRHARRDRTPNLVDGSPLDRTRKDIHQETSCKALSSEKYNSPSSYKDHEDKHIQRESNCSGTESQGEERNVQSTNEAIENETFSELVKEQKSSSPTVSYKESPRLEPPPEDLPSMEEDMDICDTPPHVPVVTDLSSGKWFYLDHVGVENGPAKLCDIKVLVDEGVLTSDHFIKHLDSDRWLTVENAVSPLAAQSFPSIVSETVTELVSPPEAPGNLLADTADIVQSGPENYTEMPASSLHPLICPNDSVFIPEHFDDTLIDERVRNLLEGYDVIPGMELEAIKEALQMNFEYSKGEGLRDYEGFPWLVSCLSDDSHPCTDLASRDSESQLSMPCGNDNGFAFGVSSDWFSTRWPCKGGDWKRNEDAQDRYSRKKLVLNNGFPLCQMPKSGCEDPRWPHKDDLYLPSQNSRLDLPLWAFCADERVDCSPVSRSVQIKPASVRGVKGNVLSVVRINACVVKDQGLLVSESRLKTRGKDRHHSRSTRHFSSTGDSKRSSTEEDSLSKAASDQGSWQSKKFISIPKDHLCTVHELQLNLGDWYYLDGSGRERGPSSFSELQYLVDKGIIKKHSSVFRKSDKLWIPVTSATETSDVSLTSQQKNSSTSGACSGLPSKQTQGFSYGEPYTNSSLFNSIHPQFSGYTRGKLHELVMKSFKSREFAAAINEVLDPWINARQPKKEMERQIYWKSEGDVRASKRARMLIDDSEEDSELDDGDVTIEKDEPTFEELCGDVTFPEQKIGITDSDVRSWGLLDGRILARIFHFLRSDLKSLVYASMTCKHWSAAGWFYKEVTMQVNLSSLGHSCTDTMLWNIMNAYEKDKINSIILMGCVNITADMLEKILLSFPALCTIDIRGCSQFGELTSKFASVKWIKSRTSRMTRIGDEPHKIRSLKHITEQTSSVSKSSNLDIDEFGQLKDYFDSVDKRDALFRQNLYKRSKLYDARRSSSILSRDARTRRWAIKKSESGFKRMEEFLASRLKEIMKTNSCDFFVPKVAEIEAKMKTGYYSSRGLSSVKEDISRMCRDAIKTKNRGDAGDMNHIITLFIQLATRLEESSKPVQDRDVLLKSWDNSSKYKKNRSVNERRYRNNGTHSGLDNVEYTSDREIRRRLSKLNKKSVDSESETSDDFDRSYEDGNSDSDTTTTNTESDQEVHSESLTRESRGNKYFTPEEELDFITDDREWGARMTKASLVPPVTRKYEVIDQYVIVADEEDVRRKMRVSLPDDYAEKLIAQKNGTEESDMELPEVKNFKPRKQLGNEVIEQEVYGIDPYTHNLLLDSMPEEFDWSLQEKHLFIEDILLRALNKQVRSFTGTGSTPMSYPLQPVLEEIKRCAEEDYDATTIRMCQGILKAIDNRPDDKYVAYRKGLGVVCDKEKGFDQDDFVVEFLGEVYPVWKWFEKQDGIRSLQKDSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGQYQIGIYSVRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFEKVLKDSHGILYRHYLMLEACELNCVSEDDYNDLGRAGLGRCLLGGLPDWLVAYAARLVRFINFERTRLPEEILKHNLEEKRKYFSEICLDVEKSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRKAPPPLEKLSPEAIVSYLWKGEGSFVEDLLQCIAPHVEEDMLNDLKSRIHARDPSSSADIQKELQKSLLWLRDEVRNLSCAYKCRHDAAADLIHIYAYTKYFFRIRDYQTITSPPVYISPLDLGPKYTNKLGAEFQEYRKTYGENYCLGQLMFWHNQSYSNPDRCLARASRGCLSLPDINSFYTKAQEPSGHRVYGPRTVRSMLARMEKQPQRSWPKDQIWSFRSSPIFFGSPMLDAVINNSSLDREMVHWLKHRPDVPGHGGLLNFGKGTERTR* 2381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3456 2380 MobiDBLite consensus disorder prediction 512 554 - -
Lja3g3456 2380 MobiDBLite consensus disorder prediction 937 955 - -
Lja3g3456 2380 MobiDBLite consensus disorder prediction 1045 1065 - -
Lja3g3456 2380 MobiDBLite consensus disorder prediction 260 275 - -
Lja3g3456 2380 CDD SET_SETD2-like 1814 1962 - -
Lja3g3456 2380 Pfam SET domain 1880 1940 IPR001214 GO:0005515
Lja3g3456 2380 MobiDBLite consensus disorder prediction 1565 1617 - -
Lja3g3456 2380 MobiDBLite consensus disorder prediction 120 162 - -
Lja3g3456 2380 ProSiteProfiles SET domain profile. 1797 1940 IPR001214 GO:0005515
Lja3g3456 2380 MobiDBLite consensus disorder prediction 1528 1551 - -
Lja3g3456 2380 MobiDBLite consensus disorder prediction 239 259 - -
Lja3g3456 2380 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1951 2363 IPR045606 -
Lja3g3456 2380 MobiDBLite consensus disorder prediction 291 340 - -
Lja3g3456 2380 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 2363 - -
Lja3g3456 2380 SMART set_7 1806 1946 IPR001214 GO:0005515
Lja3g3456 2380 MobiDBLite consensus disorder prediction 496 511 - -
Lja3g3456 2380 MobiDBLite consensus disorder prediction 341 357 - -
Lja3g3456 2380 MobiDBLite consensus disorder prediction 184 199 - -
Lja3g3456 2380 MobiDBLite consensus disorder prediction 1588 1602 - -
Lja3g3456 2380 MobiDBLite consensus disorder prediction 1565 1587 - -
Lja3g3456 2380 SUPERFAMILY SET domain 1815 1963 IPR046341 -
Lja3g3456 2380 MobiDBLite consensus disorder prediction 184 568 - -
Lja3g3456 2380 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 2363 - -
Lja3g3456 2380 MobiDBLite consensus disorder prediction 48 94 - -
Lja3g3456 2380 MobiDBLite consensus disorder prediction 1603 1617 - -
Lja3g3456 2380 MobiDBLite consensus disorder prediction 276 290 - -
Lja3g3456 2380 Gene3D SET domain 1810 1971 IPR046341 -
Lja3g3456 2380 MobiDBLite consensus disorder prediction 923 961 - -
Lja3g3456 2380 MobiDBLite consensus disorder prediction 366 485 - -
Lja3g3456 2380 MobiDBLite consensus disorder prediction 209 238 - -
Lja3g3456 2380 MobiDBLite consensus disorder prediction 48 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3456 Lja-Chr3 68239431 68254066 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lja3g3456 SET 1.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3456 K22748 - gmx:100776205 3757.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3456 3 68239431 68254066 Lja3g3456 3 68239431 68254066 ECH