Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3445 ATGGTGTTACCAATTTTACTTGTTCTATGCCTAAGCCTAACACTTCCTCTGCTTCTACTGCTCTTCTTCCATAAAAACAGAACCGTTAAGAATGCATCACAACTTCCACCTGGTCCTAGAGGCCTTCCCATAATCGGAAATCTTCATCAGCTGGATAATTCTGTCCTTTTTCTGCAACTAAAGCAACTCTCAAATATATATGGGCCCCTATTTTACCTTCAACTCGGTTTAAGACCAGCTATTGTTGTTTCTTCTGCTAAAATTGCCAAGGAAGTACTAAAAAACAATGATCTTGTGTTTTCTGATCGACCCAGCTTACTTAGCCAACAAAAATTGTCCTATAACGGGTCAGATATTGTGTTTCCCCCATACAATGATTCTTGGAGAGAAATCAGAAAAATTTGTGTTCTCCATATTTTTAGCACCAAGCGGGTCTCAAGCTTTTCCTCCATAAGAAAGTTTGAGGTCAAGCAAATGATCAAAAATATATCTGAGCAAGCTGCTTCATCGGTTGTTACAAACTTGAGTGAGTTACAGATGTCTCTCTCAAGCACTATAATATGTAGGATTGCCTTTGGGAGGAGGTATGAAGGAACCGAGGGGAGTAGGTTCCATGAGATGCTGCATGAGTTTCAGGCCCTGCTAGCCACTCTTTTTGTTTCAGATTACATTCCATTCATGGGTTGGATTGATAAAATCACAGGAAAGCATGCACGCCTGGAACAAATTTTCAGGGAGATGGATAAGTTGTACCAAGATGTAATTGATGAACATATGGATCCCAATAGACAACAAACAGAGCAAGAGGATATAGTTGATGTCTTATTTCGACTCAAGAAACAGAATTCCCTTTCAATTGATCTCACTTTGAATCACATCAAGGGTATCCTCATGAACATGCTTGTAGCTGCAACGGATACCACTGCAGCCACAATAGTTTGGGCTATGACTGCCCTAATAAAAAACCCAAGAGTGATGAAGAAATTTCAAGAAGAAGTTAGGAAATTTGGAGGAGGTAAAAAAGAACTCTTAGATGAAGATGATGTTCAAAATTTTCCTTATTTGAAGGCAGTGATAAAAGAGACATTGAGATTGTACCTACCAGGCCCACTCCTTGTGCCAAGACAATCAAATAGAAATTGCATTGTAGATGGATACCACATTCCAGCAAAGACATTAGTGTATGTGAATGGTTGGGCAATTCAGAGAGATCCAGAATTTTGGAAAGACCCAGAAGAGTTTTATCCTGAGAGATTCTTAGATAGTTCTATAAATTTTCTAGGCCTAGATTTTGAACTGATTCCTTTCGGAGCTGGTCGTAGAATCTGCCCAGGTTTGCCTATGGCCGTTGCATCATTGGAACTTGTCCTAGCTAATCTTATTTATTCATTTGATTGGGAACTGCCACATGGGTTGGTGAAGGAAGACATCGATAATGAAATGTTGCCAGGAATTACTACACACAAGAAGACTCCTCTATGCCTTTCTGCCAAGTGTGTGAATGCCACATGGATTTGTAGCAAAAATGATTAA 1533 0.3953 MVLPILLVLCLSLTLPLLLLLFFHKNRTVKNASQLPPGPRGLPIIGNLHQLDNSVLFLQLKQLSNIYGPLFYLQLGLRPAIVVSSAKIAKEVLKNNDLVFSDRPSLLSQQKLSYNGSDIVFPPYNDSWREIRKICVLHIFSTKRVSSFSSIRKFEVKQMIKNISEQAASSVVTNLSELQMSLSSTIICRIAFGRRYEGTEGSRFHEMLHEFQALLATLFVSDYIPFMGWIDKITGKHARLEQIFREMDKLYQDVIDEHMDPNRQQTEQEDIVDVLFRLKKQNSLSIDLTLNHIKGILMNMLVAATDTTAATIVWAMTALIKNPRVMKKFQEEVRKFGGGKKELLDEDDVQNFPYLKAVIKETLRLYLPGPLLVPRQSNRNCIVDGYHIPAKTLVYVNGWAIQRDPEFWKDPEEFYPERFLDSSINFLGLDFELIPFGAGRRICPGLPMAVASLELVLANLIYSFDWELPHGLVKEDIDNEMLPGITTHKKTPLCLSAKCVNATWICSKND* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3445 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Lja3g3445 510 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3445 510 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3445 510 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3445 510 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3445 510 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3445 510 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3445 510 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3445 510 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3445 510 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3445 510 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3445 510 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3445 510 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3445 510 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3445 510 Pfam Cytochrome P450 36 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3445 510 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 7 499 - -
Lja3g3445 510 SUPERFAMILY Cytochrome P450 36 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3445 510 Gene3D Cytochrome P450 22 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3445 510 PANTHER CYTOCHROME P450 71B11-RELATED 7 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3445 Lja-Chr3 67997637 68000799 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3445 22 496 Cytochrome P450 AT4G31500 46.042 1.73e-155 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3445 - - gmx:100778293 692.189