Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3444 ATGGTGTCACCACTTGTACTTGTTCTATGCCTTATTTTTCCTCTGCTTCTATATTTCTTCTTCCATAAACACATAACCTTTAAGAAACAACCACCACGTCCACCTGGTCCTAGAGGCCTTCCCATAATCGGGAATCTTCATCAACTGAACAATTCTGTTCTTTTTCTGCAACTACGGGAACTCTCAAAGATATATGGTCCACTATTTTCGCTTCAACTGGGTTTAAGGCCAGCTATTGTTGTTTCTTCAGCTAAAATTGCCAAGGAAGTACTAAAAACCAATGACATTGTGTTTTCTGATCGACCTAACCTACATGGCCAGCAGAAACTTTCCTATAACAGGTCAGATATTGTGTTCGCCCCATACAATGTTTCTTGGAGAGAAATCAGAAAACTCTGTGTTGTCCATATCTTTAGCAGCAAGCGTGTCTCAAACTTTTCCTCCATAAGAAAGTTTGAGGTCAAGCAAATGATCAAAAAAATATCAGAGCAAGCTGCTTCATCGGTTGTTACAAACTTGAGTGCGATACAAATGTCTCTCTCAAGCACTATAATGTGCAGGATTGCCTTCGGGAGGAGGTATGAAGGAACAGAGGGGAGTAGGTTCCATGATTTGATGCATGAGTTTCAGGCCATGCTGGCCTCTTTCTTTGTATCAGATTATATTCCTTTCGTGGGTTGGATCGATAAACTCACAGGAATGCATGCACGTTTGGAACAAATTTTCAAGGAGATGGATAAGTTGTACCAAGATGTCATTGATGAACACATGGATTCCAATAGACAGAAACCAGAGGAAGAGGATATAGTTGATGTGTTGCTTCGACTCAAGAAACAGAAGTCCCTTTCAATTAATCTCACTTCAAATCACATCAAGGGGGTCCTCATGGACATGCTTGTCGCTGGTACAGAAACCACTGCAGCGACAATAGTTTGGGCTATGACGAACCTAATAAAAAACCCAAGAGTGATGAAGAAACTGCAAGAAGAACTTAGAAACTTTGGTGGAGATAAAAAGGAACTCTTAGATGAAGATGATGTTCAAAAGTTTCCATATTTAAAGGCAGTGATAAAAGAGACACTGAGATTGCAACTACCAGCCCCACTCCTTGTGCCAAGACAATCAAATGAGAATTGCATTATAGATGGGTATCACATTTCAGCAAAGACAATGGTGTATGTGAATGCTTGGGCAATTCATAGAGATCCAGAGATTTGGAAAGATCCAGAAGAGTTTTACCCTGAGAGATTCTTAGACAGTTCTATAAATTTTCAAGGGCTTGATTTTGAACTGATTCCTTTCGGAGCAGGTCGTAGAATTTGTCCAGGTATGCCTATGGCGGTTGCAACACTGGAACTTATCCTTGCTAATCTTATCTATTCCTTTGATTGGAAACTACCACATGGGTTGGAAATGGAAGACATCGATACTGAAATGTTACCTGGAATTACTCAACACAAGAAGAATCCTCTTTGTCTTTCTGCCAAATGTGTGAATGCCACATGGATTTATAACTAA 1518 0.4005 MVSPLVLVLCLIFPLLLYFFFHKHITFKKQPPRPPGPRGLPIIGNLHQLNNSVLFLQLRELSKIYGPLFSLQLGLRPAIVVSSAKIAKEVLKTNDIVFSDRPNLHGQQKLSYNRSDIVFAPYNVSWREIRKLCVVHIFSSKRVSNFSSIRKFEVKQMIKKISEQAASSVVTNLSAIQMSLSSTIMCRIAFGRRYEGTEGSRFHDLMHEFQAMLASFFVSDYIPFVGWIDKLTGMHARLEQIFKEMDKLYQDVIDEHMDSNRQKPEEEDIVDVLLRLKKQKSLSINLTSNHIKGVLMDMLVAGTETTAATIVWAMTNLIKNPRVMKKLQEELRNFGGDKKELLDEDDVQKFPYLKAVIKETLRLQLPAPLLVPRQSNENCIIDGYHISAKTMVYVNAWAIHRDPEIWKDPEEFYPERFLDSSINFQGLDFELIPFGAGRRICPGMPMAVATLELILANLIYSFDWKLPHGLEMEDIDTEMLPGITQHKKNPLCLSAKCVNATWIYN* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3444 505 Pfam Cytochrome P450 34 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3444 505 Gene3D Cytochrome P450 22 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3444 505 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3444 505 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3444 505 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3444 505 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3444 505 SUPERFAMILY Cytochrome P450 34 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3444 505 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 5 497 - -
Lja3g3444 505 PANTHER CYTOCHROME P450 71B11-RELATED 5 497 - -
Lja3g3444 505 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3444 505 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3444 505 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3444 505 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3444 505 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3444 505 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3444 505 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3444 505 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3444 505 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3444 505 Coils Coil 324 344 - -
Lja3g3444 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3444 Lja-Chr3 67995690 67997636 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3444 5 494 Cytochrome P450 AT4G31500 45.253 5.20e-159 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3444 - - gmx:100801855 695.271