Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3442 ATGGATAAGTTGTACCAAGATGTAATTGATGAACATATGGATCCCAATAGACAGCAAACAGAGCAAGAGGATATAGTTGATGTCTTACTTCGACTCAAGAAACAGAATTCGCTTTCAATTGATCTCACTTTAAATCACATCAAGGGTATCCTCATGAACATGCTGGTGGCTGCAACGGATACCAATGCAGCCACAATAGTTTGGGCTATGACTGCCCTAATAAAAAACCCAAGAGTGATGAAGAAATTTCAAGAAGAAGTTAGGAAATTTGGAGGAGGTAAAAAAGAACTCTTAGATGAAGATGATGTTCAAAATTTTCCTTATTTGAAGGCAGTGATAAAAGAGACATTGAGATTGCACCTACCAGGCCCACTCCTTGTGCCAAGACAATCAAATAGAAATTGCATTATAGATGGATACCACATTACAGCAAAGGCATTAGTGTATGTGAATGGTTGGGCAATTCAGAGAGATCCAGAATTTTGGAAAGACCCAGAAGAGTTTTATCCTGAGAGATTCTTAGATAGTTCTATAAATTTTCTAGGCCTAGATTTTGAACTGATTCCTTTCGGAGCAGGTCGTAGAATCTGCCCAGGTTTGCCTATGGCCGTTGCATCATTGGAACTTGTCCTAGCTAATCTTATTTATTCCTTTGATTGGGAACTGCCAAATGGGTTGGTGAAGGAAGACATCGATACTGAAATGTTGCCCGGAATTACTCAACACAAGAAGAATCCTCTATGCATATCTGCCAAGTGTGTGAATACCAGATGGATTTGTAGCAAAAATGATTAA 795 0.3887 MDKLYQDVIDEHMDPNRQQTEQEDIVDVLLRLKKQNSLSIDLTLNHIKGILMNMLVAATDTNAATIVWAMTALIKNPRVMKKFQEEVRKFGGGKKELLDEDDVQNFPYLKAVIKETLRLHLPGPLLVPRQSNRNCIIDGYHITAKALVYVNGWAIQRDPEFWKDPEEFYPERFLDSSINFLGLDFELIPFGAGRRICPGLPMAVASLELVLANLIYSFDWELPNGLVKEDIDTEMLPGITQHKKNPLCISAKCVNTRWICSKND* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3442 264 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 190 199 IPR017972 GO:0005506|GO:0016705
Lja3g3442 264 SUPERFAMILY Cytochrome P450 2 250 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3442 264 PRINTS P450 superfamily signature 188 197 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3442 264 PRINTS P450 superfamily signature 111 122 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3442 264 PRINTS P450 superfamily signature 57 74 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3442 264 PRINTS P450 superfamily signature 197 208 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3442 264 PRINTS E-class P450 group I signature 187 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3442 264 PRINTS E-class P450 group I signature 197 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3442 264 PRINTS E-class P450 group I signature 110 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3442 264 PRINTS E-class P450 group I signature 66 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3442 264 PRINTS E-class P450 group I signature 151 175 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3442 264 PRINTS E-class P450 group I signature 46 63 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3442 264 PANTHER CYTOCHROME P450 71B11-RELATED 1 253 - -
Lja3g3442 264 Pfam Cytochrome P450 2 245 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3442 264 Gene3D Cytochrome P450 1 254 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3442 264 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3442 Lja-Chr3 67986904 67989222 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3442 1 247 Cytochrome P450 AT3G26180 49.398 2.95e-85 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3442 - - lja:Lj3g3v1475750.1 407.527