Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3441 ATGGTGTCACCGTTTGTACTCGTTCTATGCCTAACTCTTCTGCTTCTATTTTTCTTCAACCACAAACACAGAACCATCAAGAAATCACCACCTCGCCCACCAGGTCCAAGAGGCTTACCCATAATTGGTAATCTTCATCAATTGGACAATTCTGTTCTTTTTCTGCAACTCCGGCAATTCTCAAAGATCTATGGCCCATTATTTTCCCTTCAATTCGGTTTAAGACCAGCTATTGTTGTTTCTTCAGCTAAAATTGCCAAGGAAGTACTCAAAACCAATGACCTTGTGTTCTCTGATCGACCCAACTTACCATCCCAACAGAAATTATGCTATAAAGGATATGATATGGTATTCCAACCATACAATGATTCTTGGAGAGAAATCAGAAAAATCTGTGTTGTCCACATCCTCAGCAACAAGCGAGTCTCAACCTTTGCCTCCACAAGAAAGTTTGAGGTCAAGCAAATGATAAAAAAGATATCAGAGCAAGCTTCTTCATCGGTTGTTACAAACTTGAGTGAACTACTCATATCTCTGTCAAGCACTATAATATGCAGGATTGCCTTTGGGAGAAGGTATGAGGATGAAGGAACAGAGAAAAGCAAGTTCCATGATATGCTGAACGAGTTTCAGGCCCTGCTGGCTACTTTCTTTGTTTCAGATTATATTCCTTTCACGGGTTGGATCGATAAACTAACCGGATTGAACGCCCGTTTGGACAAAAATTTCAAGGAGATGGATCAGTTCTACCAAGATGTCATTGATGAACACATGGATCCCAATAGACAGAAACCAGAGGAAGAGGATATAGTTGATGTGTTGCTTCGACTCAAGAAACAGGATACGCTTTCAATTGATCTCACTACGAATCACATCAAGGGGATCCTCATGGAATGTTGTTTAATTCTATCCTCACCTTTAATTTTCCTTATAGACATGCTTGTAGCTGCAACAGATACCACTGCAGCTACAGTAGTTTGGGCTATGACTGCCTTAATTAAAAACCCAAGAGTTATGAAGAAACTTCAAGAAGAAGTTAGGAATTTTGGAGGAGGCATAAAAAAATTCCTAGACGAAGAAGATGTTCAAGAGTTTCCTTATCTGAAGGTAGTGATAAAAGAGACACTGAGATTGCACCTACCAGCCCCACTCCTTGTGCCAAGACAATCAAATGAAAATTGCCTTATAGATGGCTACCACATTCTAGCAAAGACAATGGTGTATGTGAATGCTTGGGCAATTCATAGAGATCCACAGATTTGGAAAGACCCAGAAGAATTTTATCCAGAGAGATTTTTAGATAGTTCTATAAATTTTCAAGGGTTAGATTTTGAACTGATTCCTTTCGGAGCGGGTCGTAGAATGTGCCCAGGTTCGGCTATGGCGCTTGCATCCGTGGAACTTATCCTTGCTAATCTTATGTATTCTTTTGATTGGGAACTGCCACATGGGTTGGTCAAAGAAGACATCGATACTGAAATATTGCCAGGAATCACTCAACACAAGAAGCATCCTCTCTGCCTTTATGCCAGATGTGTGAATACCACATAG 1551 0.4036 MVSPFVLVLCLTLLLLFFFNHKHRTIKKSPPRPPGPRGLPIIGNLHQLDNSVLFLQLRQFSKIYGPLFSLQFGLRPAIVVSSAKIAKEVLKTNDLVFSDRPNLPSQQKLCYKGYDMVFQPYNDSWREIRKICVVHILSNKRVSTFASTRKFEVKQMIKKISEQASSSVVTNLSELLISLSSTIICRIAFGRRYEDEGTEKSKFHDMLNEFQALLATFFVSDYIPFTGWIDKLTGLNARLDKNFKEMDQFYQDVIDEHMDPNRQKPEEEDIVDVLLRLKKQDTLSIDLTTNHIKGILMECCLILSSPLIFLIDMLVAATDTTAATVVWAMTALIKNPRVMKKLQEEVRNFGGGIKKFLDEEDVQEFPYLKVVIKETLRLHLPAPLLVPRQSNENCLIDGYHILAKTMVYVNAWAIHRDPQIWKDPEEFYPERFLDSSINFQGLDFELIPFGAGRRMCPGSAMALASVELILANLMYSFDWELPHGLVKEDIDTEILPGITQHKKHPLCLYARCVNTT* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3441 516 PANTHER CYTOCHROME P450 71B11-RELATED 5 512 - -
Lja3g3441 516 Pfam Cytochrome P450 33 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3441 516 SUPERFAMILY Cytochrome P450 33 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3441 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Lja3g3441 516 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3441 516 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3441 516 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3441 516 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3441 516 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3441 516 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3441 516 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3441 516 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3441 516 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3441 516 Gene3D Cytochrome P450 18 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3441 516 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3441 516 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3441 516 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3441 516 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3441 516 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 5 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3441 Lja-Chr3 67967394 67969059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3441 6 508 Cytochrome P450 AT4G31500 46.047 4.60e-158 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3441 - - gmx:100801855 677.167