Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3438 ATGAATGAAGACGACAATGACTACGCTGATGGACAAAACAACAATTCAGCTTATCAATTTGAGGGTGAGGGCCTTGGTGACCACGGCGATTATGATCTTCATGAGACTGAGCTTGACTCCGGTGAAAGGTCGACAAGCGATCTCGATGGCGAAGAAAACAGCTCTATTTGTGATGAGGACGAAGGTTCGCCTGACACAGCTAACCCAGCTGACAATACAGATGATGTAGCGGGGGTAAATTATAACGAAATGCATGGCAAAATACCCGTCAATCCTGTCAGAATTGATTCAAAGGATGACTTTCTCCTTCTGGATCTAATGACCATGAGACTGGAGGAAATCATGAGGTTTTCATTTTTGAGCTTGGAGCTGGCGTTCGAGTTCTACTGTTGGTTTGGAAGATTGTCCGGATTCTCTATTCGTAAAGACACCAAACGCTGGACCAAGAAAGGAGAGGTACGCCAACAAACTTTTGTGTGTCATAGGGAAGGCTTTCGCAAGAACAGTGATGTGAAGCGGACAGCTGAGGCTAGGAGTAATTATAGGTGTGGATGCAAAGCTAAATTACGGGTCCATATTCAGGGTTACTCAAAACGGTGGTACATCAGCTTGTTTGTACACGCTCATAACCACGACGTGCTCCAAAGAAGCCATGCACAAATGTTGGCTGCACACCGGCAAATGCACGAAGCGGATATCTTGAGTTTGAAAACTCATTTGAGTTCGGGTCTAACAACAGCCGACGTCTACAATTCACATGCTGCACAGGTTGGGGGGTATAACAACACGCAATACAGCTTGAAAGATCTGCAGAACCAAGTTGGGAAGCAACGACGAGCACATGTTTCAGATGGACGCAGGGCATTAGATTATCTAGCCTCGTTAGATATTTCTTAG 897 0.4548 MNEDDNDYADGQNNNSAYQFEGEGLGDHGDYDLHETELDSGERSTSDLDGEENSSICDEDEGSPDTANPADNTDDVAGVNYNEMHGKIPVNPVRIDSKDDFLLLDLMTMRLEEIMRFSFLSLELAFEFYCWFGRLSGFSIRKDTKRWTKKGEVRQQTFVCHREGFRKNSDVKRTAEARSNYRCGCKAKLRVHIQGYSKRWYISLFVHAHNHDVLQRSHAQMLAAHRQMHEADILSLKTHLSSGLTTADVYNSHAAQVGGYNNTQYSLKDLQNQVGKQRRAHVSDGRRALDYLASLDIS* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3438 298 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 110 242 - -
Lja3g3438 298 MobiDBLite consensus disorder prediction 1 78 - -
Lja3g3438 298 MobiDBLite consensus disorder prediction 25 49 - -
Lja3g3438 298 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 110 242 - -
Lja3g3438 298 Pfam FAR1 DNA-binding domain 127 214 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3438 Lja-Chr3 67924076 67928827 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lja3g3438 FAR1 5.3e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3438 - - mtr:MTR_1g070355 190.274