Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3433 ATGAAGGCCATGCCCTTGTCCCCTTTTGAGGAATTTCAAGGGAAGAAGGGTGTGTTGTTGGATTTCACCTCATCCTCAGATTCATTCTCACTGCTTTTACATCATCATCATCATCAGAATCAGCCACAAAAGTGGACCTGCAGTGACAAAAAGGAGGATTTTTGCTATGTGGGCAGCACTGAGCCCAACTCTGTTCTTGACTCCAGAAGAAGCCCAACCTCTCCTACCTCCTTCTCCACAATGTCCTCCTCTCTTGGCAGCAGCAGCAGCAACAGCTCCGGCAACGGTGGTGGTGGTGGCTCAGCCAACACCACCGCCACAGCAGTGCCAACTGTCTCAGAGAATCTTCCTCATGAAGACTGGGATGGTCAAGATCAATCTCTTCTGAGACTAATCATGGGTGATGTTGAAGACCCATCTGCAGGATTGACCAAGCTCTTGCAAAGCACTGGTTGTGGGTCTCAAAATGTTGATTTCAGTGGAAATTTTGGTGTTGTGGATCAAGGGTTGAACATGGAAAGTGATATCAACTCTTCTATGCCAGAGAGTTACAATTACCCTGGTTTTGGATTCAATTCTGGGAACATGGATGCTCACAATGCTAAGGTTTCAGAATCCATGTTCTCTTCTTCAGGTAATATGAACAATCCTCTTTTGGTGTCATCATCTCCTGGTGGATTCAGTTCTCAGCAGCAGGAGTTTGGGGTAGTGGGTGAGAAGCCTCAGGTTATCAACCCACAGTTTCTGTTAAACCAGAACCAAGTTCAATTCTCTGAGAATCCCTCTTTCTTTGTGCCATTGAGGTACCCTCAAGTGCAAGAGCAGCAAGTTTTCTCTCAGCACATGGTTGGGCACAATTATCAGGCTCCAAGGTTACCCCTTTTGGGTTCTGGACAAGAGATGTTTGTTAAAAGGCCTCAGACACAGGTTCCACTGTTTCCTCACCATATCCAACAACAGCAATCATTGGTTGTTGCTCCTTCTGGTAAACAGCAGAAGGTGAATCCTACCGGAGACGATGCAAATCACCAGCTCCAGCAGGCTATCTTTGATCAGCTATACAAGACTGCTGAACTGATAGAAGCTGGTAATCCGGTTCAAGCACAAGGGATATTGGCGCGGCTCAATCACCAGCTCTTCCCTACTGGTAAGCCTTTTCAGAGGGCTGCTTTCTATATGAAGGAGGCCTTGCAGTTAATGCTTCATTCAAACATTCATAATTTGATGGCTTTCTCACCTATTAGTTTCATATTTAAAATTGGTGCTTATAAATCGTTTTCTGAGATATCACCGGTTCTTCAGTTTGCCAATTTTACTTGCAATCAATCCCTCATCGAGGCTTTGGAAAGGTTTGATCGGATTCATATTATTGATTTCGATATCGGGTTCGGAGTGCAATGGTCCTCTTTTATGCAAGAGCTTGCCTTCAGAAGTAGTGGAGCACCTTCACTTAAAGTCACTGCTGTTGTTTCGCCCACAACTTGCAATGAGTTTGAGCTCAATTTCACCTGTGACAATTTGAATCAATATGCGAAAGACATTAACATGTCATTTGAGTTCAATGTTTTGAACATTGAATCATTGAACTCTCCTACTTGTCCCCTGCCTGTTCATTTCTTTGAAAATGAGGCTATTGGTGTCAATATGCCAATCTCAAGTTTCACTAATTACCCATCATTGTTTCCTTTAGCGGTTCAGTTTGTAAAACAGCTCAGGCCAAAAATTGTTGTCACTTTGGACCGAAACTGTGATCGTATCGATTTACCACTTCCCAACAACATAGGCCATGTTCTTCAATGTTATTCAGCTTTGCTTGAATCATTGGATGCTGTAAATGTGAACCAAGATGTTCTTCAAAAGATCGAGAGACATTTCGTCCAACCAGCTATAAAGAAAATCGTACTGGGCCACCATCATTCGCAGGAGAAATTAACTCCATGGAGGAACCTGTTTCTTCAATCTGGATTCTCTCCATTCACATTCAGCAACTTCACAGAAGCTCAAGCTGAGTGTTTGGTACAGAGGGCGCCTGTGCGGGGATTTCAAGTGGAAAGAAAACCCTCCTCTCTTGTTCTGTGCTGGCAGAGAAAAGAACTTATCTCGGTTTCGACTTGGAGATGCTGA 2124 0.4393 MKAMPLSPFEEFQGKKGVLLDFTSSSDSFSLLLHHHHHQNQPQKWTCSDKKEDFCYVGSTEPNSVLDSRRSPTSPTSFSTMSSSLGSSSSNSSGNGGGGGSANTTATAVPTVSENLPHEDWDGQDQSLLRLIMGDVEDPSAGLTKLLQSTGCGSQNVDFSGNFGVVDQGLNMESDINSSMPESYNYPGFGFNSGNMDAHNAKVSESMFSSSGNMNNPLLVSSSPGGFSSQQQEFGVVGEKPQVINPQFLLNQNQVQFSENPSFFVPLRYPQVQEQQVFSQHMVGHNYQAPRLPLLGSGQEMFVKRPQTQVPLFPHHIQQQQSLVVAPSGKQQKVNPTGDDANHQLQQAIFDQLYKTAELIEAGNPVQAQGILARLNHQLFPTGKPFQRAAFYMKEALQLMLHSNIHNLMAFSPISFIFKIGAYKSFSEISPVLQFANFTCNQSLIEALERFDRIHIIDFDIGFGVQWSSFMQELAFRSSGAPSLKVTAVVSPTTCNEFELNFTCDNLNQYAKDINMSFEFNVLNIESLNSPTCPLPVHFFENEAIGVNMPISSFTNYPSLFPLAVQFVKQLRPKIVVTLDRNCDRIDLPLPNNIGHVLQCYSALLESLDAVNVNQDVLQKIERHFVQPAIKKIVLGHHHSQEKLTPWRNLFLQSGFSPFTFSNFTEAQAECLVQRAPVRGFQVERKPSSLVLCWQRKELISVSTWRC* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3433 707 MobiDBLite consensus disorder prediction 61 106 - -
Lja3g3433 707 Pfam GRAS domain family 351 706 IPR005202 -
Lja3g3433 707 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 11 706 - -
Lja3g3433 707 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 11 706 IPR005202 -
Lja3g3433 707 ProSiteProfiles GRAS family profile. 340 706 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3433 Lja-Chr3 67764684 67767612 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3433 348 707 GRAS Transcription Factor Family AT4G00150 54.545 2.90e-125 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lja3g3433 GRAS 1.9e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3433 - - gmx:100801785 950.273