Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3432 ATGACCGACGACAGATTAGAAGCCTTCATATGGCTTCTCTGCAGCCTCATACTAGTGTTAGTATTCGTTATATATGCCGGCATTGACGCAATAAATTCACGGCTTTCAAATCCATCTTGCAGGAAACATGATGAGGTCGACACAATTCCAAGTTCCCCAAAGGTGCTTGAATCCAAGCCCAAGCTCATAAAAAAGTACGCTGATTCCATAGCAACATATTGTTCCATATGTTTGAGAGATTACAAGTATGATGGTGTGCTTAGGGTGTTGCCTAACTGTGAGCATTTTTTTCATCTCAAGTGCATAGACTCTTGGTTGAGGATGCATCATACCTGTCCTCTCTTCATATCATCTCCAAACCAAACACCTCTGGCTGAAGTGGTTCCATAA 390 0.4205 MTDDRLEAFIWLLCSLILVLVFVIYAGIDAINSRLSNPSCRKHDEVDTIPSSPKVLESKPKLIKKYADSIATYCSICLRDYKYDGVLRVLPNCEHFFHLKCIDSWLRMHHTCPLFISSPNQTPLAEVVP* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3432 129 PANTHER RING-H2 FINGER PROTEIN ATL71-RELATED 47 129 - -
Lja3g3432 129 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 47 129 IPR045899 -
Lja3g3432 129 SUPERFAMILY RING/U-box 73 114 - -
Lja3g3432 129 SMART ring_2 74 115 IPR001841 -
Lja3g3432 129 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 118 IPR013083 -
Lja3g3432 129 Pfam Ring finger domain 73 114 IPR001841 -
Lja3g3432 129 ProSiteProfiles Zinc finger RING-type profile. 74 114 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3432 Lja-Chr3 67724554 67724943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3432 47 129 C3H Transcription Factor Family AT2G35910 52.874 1.09e-21 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3432 - - cpap:110810581 102.064