Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3431 ATGCCCTTGCCTTTTGAGGGATTTCAAGGGCAGGGTGGTGTGTTGGATTTCTCTGCTGCATCAGATTCATTGTTTCCTCTGCTTTTGCATCCACAAAAGTGGACCAGAGACAGAGAAAATTGCTATGTGGGCAGCACTGAGCCCACCTCTGTTCTTGACTCCAGAAGAAGCCCAAACCATTCTACTTCCTCCTCCACCATGTCCTCTTCAACCACCAGCAAGGGTAGTGGTGGTGTTGCAGCACCAACCTTGTCTCAGAACTACCCACCATGGGAAGAAGAAAAATGTGGGGTGCCAATGGAGGATTGGGAGGGTCAAGGTCAATCAATTCTGAGACTAATCATGGGTGATGTGGAAGCCCCATCTGCAGGATTGAGCAAGCTCTTTCACAGCACTGGCTATGGGTCTCACAGTGTTGATTTCAATGGAGGTTTTGGTGTTCTGGATCAAGGGTTGAACATGGTTAGTATTGTTGACCCTTCTGTGCAAGGGAACTATCCTGGTTTTTCATTCATTGCTGAGAATATAGATAGCCACAATGCAGAATCTAACTTTTCTGGTTTTGGTAACAACTCTCTGCTGTCATCATCTCCGGGTATGTTTAATTCTCAGCAGCATCAAGGGATTGGAGAAGTAGATGAGAAACCTCAAGTCATCAATCCCCAGTTTCTGTTAAACCAGAATCAAGTTCAATTCCCTGAGAACCCTTCTTTCTTTGTGCCATTGAGGTACCCTCAAGTGCAAGAGCAGCAAGTGTTGTCTCAGAATCAAGCGAAACGCCTTCCTTTCGACACGGTTGGGCACAATTATCAGGCTCAAGTTCCAAAGTTACCCCTTTTGGATTCTGGGCAAGAGGTGTTTGTTAAAAGGCACCAAACACAGCTTCCATTGTTTCCTCATCATATGCAACAACAGCAATCATTGATGGTGCCTTCTGCTAAACAGGAGAAGGTGGATTCTACTGGAGACGATGTGAACAACCAGCTTCAGCAGAGTATATTTGATCAGCTATACAAAACTGCTGAACTGATAGAAGCTGGTAACCCGGTTCATGCCCAAGGGATATTGGCGCGGCTCAATCACCAGCTTTCCCCTAATGGTAAGCCTTTTCACAGGGCTGCTTTCTACATGAAGGAGGCATTGCAGTCAATGCTTCATTCAAATGGTCACAATTTTCTCACCTTCTCACCCATTAGTTTCATATTCAAAATTGGAGCTTATAAATCTTTTTCTGAGATATCACCTGTTCTTCAGTTTGCCAACTTTACTTGCAATCAAGCCCTCATTGAAGCTGTGGAAAGATTTGATCGAATTCACATTATTGATTTTGATATCGGGTTTGGAGTGCAGTGGTCTTCTTTTATGCAGGAGCTTGCTCTGATGAGGAGTAGTGGCGTGCCTTCACTTAAAGTTACTGCTGTTGTATCACCCTCCACTTGTGATGAAATGGAGCTCAATCTTACCCAAGAAAACTTGAGTCAATTCGCAAAAGACATCAACATGTGTTTTGAGTTAAATGTTTTGAGCATTGAATCATTGAACAGTTTTCAGTTCTTTGATGATGAGGCTATCGCTGTGAACATGCCGGTATCTTGCTTAGCAAATTATCCATCATTGTCTCCTTCAATCCTTCAATTTGTAAAGCAGCTTAGGCCAAAAGTGGTGGTCACCATGGATAGAAATTGTGATCGAATTGATGTACCATTTGCCACTAATGTAGCTCATGCTCTTCAATGTTATTCAGCCTTACTTGACTCACTTGATGCCGTAAATGTGAACCTTGACATCCTCCAAAAGATTGAGAGGCATTTCATCCTTCCTGACATGAAGAAAACCATATTTGGTCATAACCATTCGCATGAAAAATTGCCTCCTTGGAGGAGCATGTTTCTTCAGTATGGGTTCTCTCCATTCACATTTAGTAACTTCACAGAATCTCAAGCTGAGTGTTTAGTGCAGAGAGCACCTGTAAGGGGATTTCAGCTAGAGAGGAAGCACTCCTCTTTTGTTCTGTGCTGGCAGCAGAAAGAACTCATCTCAGTTTCAACTTGGAGATGCTGA 2061 0.4343 MPLPFEGFQGQGGVLDFSAASDSLFPLLLHPQKWTRDRENCYVGSTEPTSVLDSRRSPNHSTSSSTMSSSTTSKGSGGVAAPTLSQNYPPWEEEKCGVPMEDWEGQGQSILRLIMGDVEAPSAGLSKLFHSTGYGSHSVDFNGGFGVLDQGLNMVSIVDPSVQGNYPGFSFIAENIDSHNAESNFSGFGNNSLLSSSPGMFNSQQHQGIGEVDEKPQVINPQFLLNQNQVQFPENPSFFVPLRYPQVQEQQVLSQNQAKRLPFDTVGHNYQAQVPKLPLLDSGQEVFVKRHQTQLPLFPHHMQQQQSLMVPSAKQEKVDSTGDDVNNQLQQSIFDQLYKTAELIEAGNPVHAQGILARLNHQLSPNGKPFHRAAFYMKEALQSMLHSNGHNFLTFSPISFIFKIGAYKSFSEISPVLQFANFTCNQALIEAVERFDRIHIIDFDIGFGVQWSSFMQELALMRSSGVPSLKVTAVVSPSTCDEMELNLTQENLSQFAKDINMCFELNVLSIESLNSFQFFDDEAIAVNMPVSCLANYPSLSPSILQFVKQLRPKVVVTMDRNCDRIDVPFATNVAHALQCYSALLDSLDAVNVNLDILQKIERHFILPDMKKTIFGHNHSHEKLPPWRSMFLQYGFSPFTFSNFTESQAECLVQRAPVRGFQLERKHSSFVLCWQQKELISVSTWRC* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3431 686 Pfam GRAS domain family 335 685 IPR005202 -
Lja3g3431 686 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 8 685 - -
Lja3g3431 686 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 685 IPR005202 -
Lja3g3431 686 MobiDBLite consensus disorder prediction 45 95 - -
Lja3g3431 686 ProSiteProfiles GRAS family profile. 324 685 IPR005202 -
Lja3g3431 686 MobiDBLite consensus disorder prediction 45 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3431 Lja-Chr3 67709749 67712887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3431 333 686 GRAS Transcription Factor Family AT4G00150 53.760 1.33e-125 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lja3g3431 GRAS 4.4e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3431 - - gmx:100801785 941.799