Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3411 ATGGCAGCAAGTTCTCAAGTAAGAATCTGTTTGCTCATATGGCTGATTGGGATAGCCTCATCCTTGGATTTAGTTTCTTCAGCAAATACTGCTGTGACGCCTGATTCTAATCAGTTAAGCCCTGGATTTTATAATTTAAAGTGTCCCTTGGCACTTCCTACCATTAAGGCAGCAGTAATCGCGGCTGTGTTGAAAGAGCGTCGAATGGGTGCATCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGTCCAAGGGTGTGATGCATCAGTATTGTTAAAGGACACAACAACTTTCAAGGGCGAACAAAGTGCATTACCCAATGTTAATTCTCTAAGGGGGTACGATGTCATAGACAACATAAAAGCACAACTAGAGAAATGGTGCCCTGGTGTTGTCTCTTGCGCTGACATTGTTGCCACTGCTGCAAGGGATTCTGTTGTTGTGCTTGGTGGACCTGCTTGGGACGTTCGCTTGGGAAGAAGAGACTCTACAACTGCGAATTTATCTGCTGCAAACTCAGATTTACCTTCTCCTTTTCTGGATCTCAGTGGCCTTATTGCAGCTTTCGAAAAGAAGAATTTCTCTGTTGATGAAATGGTTGCTTTATCAGGTGCTCACACAATAGGCCAATCAAGGTGTTCACTCTTCCGGTCAAGAATCTACAGCGAGCAAAATATAGATCCCGCCTATGCAAGATCATTGCAAGGACAATGCCCCAGGACAAGTGGTGTTGGTGATAGTAACTTATCTCCTATTGACACCACTCCAAACTTTTTTGACAGCACTTATTACAGAAACTTGATGAACAAAAAGGGTCTTTTCCACTCTGATCAACAACTTTTCAATGGTGGTTCCACTGATTCCAAAGTTTCTCAGTATGCTAGTAACCCTCTACTATTCAGGATTGATTTTGCTAACGCCATGGTCAAGATGGGTAACCTTGGCACACTAACCGGGACACAAGGTCAGATCAGAAAAGTATGCAGCAGTGTCAATTAA 999 0.4324 MAASSQVRICLLIWLIGIASSLDLVSSANTAVTPDSNQLSPGFYNLKCPLALPTIKAAVIAAVLKERRMGASLLRLHFHDCFVQGCDASVLLKDTTTFKGEQSALPNVNSLRGYDVIDNIKAQLEKWCPGVVSCADIVATAARDSVVVLGGPAWDVRLGRRDSTTANLSAANSDLPSPFLDLSGLIAAFEKKNFSVDEMVALSGAHTIGQSRCSLFRSRIYSEQNIDPAYARSLQGQCPRTSGVGDSNLSPIDTTPNFFDSTYYRNLMNKKGLFHSDQQLFNGGSTDSKVSQYASNPLLFRIDFANAMVKMGNLGTLTGTQGQIRKVCSSVN* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3411 332 ProSiteProfiles Plant heme peroxidase family profile. 38 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3411 332 SUPERFAMILY Heme-dependent peroxidases 38 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja3g3411 332 CDD secretory_peroxidase 38 331 IPR033905 GO:0004601|GO:0042744
Lja3g3411 332 ProSitePatterns Peroxidases active site signature. 70 81 IPR019794 GO:0004601
Lja3g3411 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 198 208 IPR019793 -
Lja3g3411 332 PRINTS Haem peroxidase superfamily signature 132 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3411 332 PRINTS Haem peroxidase superfamily signature 150 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3411 332 PRINTS Haem peroxidase superfamily signature 198 213 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3411 332 PRINTS Haem peroxidase superfamily signature 70 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3411 332 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3411 332 Pfam Peroxidase 56 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3411 332 PANTHER PEROXIDASE 72-RELATED 31 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3411 332 Gene3D Peroxidase, domain 2 176 311 - -
Lja3g3411 332 Gene3D - 43 329 - -
Lja3g3411 332 PANTHER PEROXIDASE 31 332 - -
Lja3g3411 332 PRINTS Plant peroxidase signature 131 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3411 332 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3411 332 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3411 332 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3411 332 PRINTS Plant peroxidase signature 197 209 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3411 332 PRINTS Plant peroxidase signature 150 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3411 332 PRINTS Plant peroxidase signature 112 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3411 332 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3411 332 PRINTS Plant peroxidase signature 72 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3411 Lja-Chr3 67298169 67300291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3411 38 332 Peroxidase AT5G05340 60.135 4.91e-131 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3411 K00430 - gmx:100811432 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3284 1 40714152 40717151 Lja3g3411 3 67298169 67300291 PCT