Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3375 ATGAGGCTGAGTTATGATGATCTGGATCGTAAAGAGCAACAGATGTTTCTAGATCTTGCATGTTTCTTTGATGGATTGATTTTGGAGGCAAGCTACATAAAAATCTTGTTGAAAGATCATGAAAGTGACAATTCAGTAGCTGTTGGGTTTGAAAGGTTGAAAGATAAAGCTCTTCTAGCTATATCTGAAGATAATATTGTATCGATGCATGATATTCTTCAAGAACTTGCATGGGAGATTGTTCGCCAAGAATCAAGTGACCCTGGAAGCCGTAGTCGATTGTGGGATTCAGATGACATTTATGAAGTATTAAAAAATGATAAGGGGACTGAGGCCATTAGAAGCATAAGGACTGACTTGTCAACAATTAGGATGTTGAAGCTAAGCCCTCACATATTTGTTAAGATGAACAGCCTACAATATCTGGATTTTCATGGTGAACATGATGAAGACAGATTGGATCTTCTTCCTCAAGGGCTTCAATATTTGCTGACTGAACTAAGCCGACTGGAAAAGCTTTGGTATGGAGAGCAGAATCTTGTGAATTTAAAAGAAGTAAAACTGTACGATAGCGAATTTCTGAAGGAGCTGCCAGACTTTTCAAAAGCCATAAATCTTGAAGTATTGGATATCCGATTTTGTGAAGTTAAGGATGAAACTTCTGCAGTAGCTTGGAGGTGTCTTGTCTCTTGTATACCTAGGGAAAAGGTTGAAATTATGGCCATTATGCTCAGGCGTAAGGAATTCACTGGTTTTTGCAATCCATCTGCTGTCCTTGATGCTTGTGATGCTGCTATATCTGCAATGAAACCTGGAAATTTGAATCCCAACGGCCATAGCATAAGTTGTTACTTACCAACCATCGACCTCATATTCATGATCTAA 885 0.3864 MRLSYDDLDRKEQQMFLDLACFFDGLILEASYIKILLKDHESDNSVAVGFERLKDKALLAISEDNIVSMHDILQELAWEIVRQESSDPGSRSRLWDSDDIYEVLKNDKGTEAIRSIRTDLSTIRMLKLSPHIFVKMNSLQYLDFHGEHDEDRLDLLPQGLQYLLTELSRLEKLWYGEQNLVNLKEVKLYDSEFLKELPDFSKAINLEVLDIRFCEVKDETSAVAWRCLVSCIPREKVEIMAIMLRRKEFTGFCNPSAVLDACDAAISAMKPGNLNPNGHSISCYLPTIDLIFMI* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3375 294 Gene3D - 1 79 IPR036388 -
Lja3g3375 294 Gene3D Ribonuclease Inhibitor 110 242 IPR032675 -
Lja3g3375 294 SUPERFAMILY L domain-like 69 218 - -
Lja3g3375 294 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 215 - -
Lja3g3375 294 SUPERFAMILY "Winged helix" DNA-binding domain 2 105 IPR036390 -
Lja3g3375 294 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 215 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3375 Lja-Chr3 66511818 66516297 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3375 8 214 WRKY Transcription Factor Family AT4G12020 34.959 8.55e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3375 - - ccaj:109791596 305.449