Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3359 ATGGCTTCTTATGACTTCCTCTTCTTTCCCATTTTCCTAGTTGCTACCCATGCTTTTGAGTTTCAATTCACTGGATTCAATAACAATGAAATTAGCAACCTCACCCTTGGTGGAGCTTCCAAAATTGTCAAACCCCAAGGTACACTTGAGCTCACCACTCGAACACACAATACTATAGGCCATGCATTCTACAACAAACCAATTCAAATGTTTGACAAAACAAACAATTCACTTCAATCAAATGTTTCTTCCTTCAGCACATGCTTTGTCTTCTCAATTGTACCCCCACCAGGTTCTTCCCCTGGCGGCTTTGGCCTCACCTTCGCCATAGCTCCCTCGCCGCAACTTCCCGGAGCTTCCGCGGACCATTTCCTTGGCCTCTTCAACTTATCCAATGATAACAATACCTCAAACCACATCTTTGCTGTTGAATTTGACACAGTGAATGGTTACAAAGACTCATCAGACACTGAAGGGAACCATGTTGGAGTGAATTTGAACAGCATGTCCTCAATTATCTCTGAGCCTGTGGCTTACTATGCAGAAGGCACTGATGCAAGGAAGGAAGATTTCAACATGGAGAAAGCTGATGCTGTTTCTGCTTGGATAGAATATGATGGTGAGACACAAATTTTGAATGTAACAGTAGCCCCTTTTTTAGTACCAAAACCAAGCAAACCTCTTATATCTAAAGTCGTTGATCTTAAGTCTATCATGAAGGAAGACATGTTTGTTGGTTTCTCAGCTTCAACAGGACAGAGAAAAGCAAGTTCTCATTTTATTTTGGGATGGAGTTTTTCATTGAATGGAGCTGCTCCTCAACTCAACATTTCACAGCTTCCAAATCCACCAAGCAAGGAGAAAGATCCATCCTCATTTCCTTGGGCCAAGGTTGCAATTGGCTTAATCTCTGCTTTGACATTTACCTTGTTGTGTGTTTTATGTTTACTAACACTTTACAAGAGATACACGCAATTTGAAACTCTTGAGGACTGGGAGATGGAGTGTCCTCACAGATTCAGATATAAAGATCTTCTCATTGCAACCAATGGTTTCAAAGAGAGCCTGCTAATTGGAGTTGGAGGGTTTGGTTCTGTTTACAAAGGTGTGTTGCCTAGCACAGGAAATGAGGTTGCTGTTAAAAGAATCATGAGCAACCCAATGCAAGGAATGAGGGAATTTGCAGCTGAGATTGAAAGCTTAGGAAGATTGAGGCACAAGAATTTGGTCAATCTTCAAGGGTGGTGTAAGAACAAGAATGATCTAATCCTAATCTATGATTACATTCCAAATGGGAGTCTTGATTCACTTCTATACAATGAAAATCTTGCTTTGGATTGGGATCAGAGGTTTAAAATTCTCAAAGGGGTAGCTGCTGGTTTATTATATCTTCATGAAGAGTGGGAGAAAGTGGTGATTCATAGAGATGTGAAATCTAGTAACATTCTAATTGATGAGGAATTGAATGCTCGTTTAGGTGATTTCGGGCTAGCGAGGCTTTGTGATCATGATCAAGTGTCACACACAACAAGTGTGGTTGGCACAATTGGGTACATGGCACCAGAGTTAACTAGGACTGCAAAAGCTTCTACAAGCTCTGATGTGTATGCATTTGGGGTTCTGCTACTTGAAGTTGTTGCTGGGAAAAGACCAGTGGGCTCAGGTCAGTTTTTCTTGGTGGATTGGGTTATTGAAAATCTCCAACTTGGTCAGATTCTTAAAGTGGTTGATCCTAACCTGGATTCAGTTTATGATGAGGAAGAAGTGGAGTTGGTTCTGAAATTGGGTCTCCTTTGCACTCAACAAGGAGCAAGTTATAGGCCAACCATGAAACAAGTGACTAGGTACCTAAATTTTGATGACCCTCTACCTGATTTTGATTGGAGACACTATGATGATTCTCTGAGCAGCAGAACGAGCTCAAGTTTCTTAGGAGACATGTCTTCATCCTCATACACCTTGTCCTCCATTGGTAGGAGTGCAATATTGTCTATAGAAACTACTAGATAG 2010 0.4124 MASYDFLFFPIFLVATHAFEFQFTGFNNNEISNLTLGGASKIVKPQGTLELTTRTHNTIGHAFYNKPIQMFDKTNNSLQSNVSSFSTCFVFSIVPPPGSSPGGFGLTFAIAPSPQLPGASADHFLGLFNLSNDNNTSNHIFAVEFDTVNGYKDSSDTEGNHVGVNLNSMSSIISEPVAYYAEGTDARKEDFNMEKADAVSAWIEYDGETQILNVTVAPFLVPKPSKPLISKVVDLKSIMKEDMFVGFSASTGQRKASSHFILGWSFSLNGAAPQLNISQLPNPPSKEKDPSSFPWAKVAIGLISALTFTLLCVLCLLTLYKRYTQFETLEDWEMECPHRFRYKDLLIATNGFKESLLIGVGGFGSVYKGVLPSTGNEVAVKRIMSNPMQGMREFAAEIESLGRLRHKNLVNLQGWCKNKNDLILIYDYIPNGSLDSLLYNENLALDWDQRFKILKGVAAGLLYLHEEWEKVVIHRDVKSSNILIDEELNARLGDFGLARLCDHDQVSHTTSVVGTIGYMAPELTRTAKASTSSDVYAFGVLLLEVVAGKRPVGSGQFFLVDWVIENLQLGQILKVVDPNLDSVYDEEEVELVLKLGLLCTQQGASYRPTMKQVTRYLNFDDPLPDFDWRHYDDSLSSRTSSSFLGDMSSSSYTLSSIGRSAILSIETTR* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3359 669 Gene3D Phosphorylase Kinase; domain 1 318 428 - -
Lja3g3359 669 Pfam Protein kinase domain 355 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g3359 669 PANTHER - 22 661 - -
Lja3g3359 669 SUPERFAMILY Concanavalin A-like lectins/glucanases 18 285 IPR013320 -
Lja3g3359 669 Gene3D Transferase(Phosphotransferase) domain 1 429 626 - -
Lja3g3359 669 Pfam Legume lectin domain 20 281 IPR001220 GO:0030246
Lja3g3359 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Lja3g3359 669 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Lja3g3359 669 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 22 661 - -
Lja3g3359 669 CDD lectin_legume_LecRK_Arcelin_ConA 19 270 IPR001220 GO:0030246
Lja3g3359 669 CDD STKc_IRAK 358 618 - -
Lja3g3359 669 ProSiteProfiles Protein kinase domain profile. 352 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g3359 669 SMART serkin_6 352 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g3359 669 SUPERFAMILY Protein kinase-like (PK-like) 336 631 IPR011009 -
Lja3g3359 669 Gene3D - 17 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3359 Lja-Chr3 66322782 66325238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3359 20 649 Receptor kinase-like Gene Family AT3G08870 52.795 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lja3g3359 Pkinase 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3359 - - lja:Lj0g3v0193259.1 1014.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3359 3 66322782 66325238 Lja3g3359 3 66322782 66325238 ECH