Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3344 ATGGACTACTTGAAATTCATCCCACTAATTTCCTTTGTATATGCATGCATCCACATCCTGTTCTCTAGCCTTAGCAGCAAAAACACAAAATGTCCCAAACTCCCACCAGGGCCTCCCTGTTATCCTATAATTGGAAACATATTGCAACTTGGCACATTCAAGCTGCACCAAGCACTCACCAAACTCTCCAAAAAATATGGACCTATTATGACTGTTAGAATAGGCACCATCACCACTGTGGTAATTTCCTCCCCAACCATAGCCAAAGCAGCACTTCACAAACATGACCAAGACTTAGCTAACAGATTAATACCAGATTCTGTCCAAGCACTTTCCCATGACAAAGCCTCTCTAATCTTCATGCCTGTATCAGCAAAGTGGAAAATCTATAGAAAAATCTGTGCCACCACAATCTTCTCTTCTCAGAAGCTTGATTCTACTCAATCCCTTCGCCGCGAAAAGCTAAGAGAACTGCTTGCTTACTTGCAAGAATGTTGCAAGAAGGGTGAAGCTATTGATATTGGTGAGACTGCATTCACCACAGTGCTTAACTCAATATCAAACACCCTTTTTTCCACTGACATGGCTAGCTACACCTCTGGTTCTTCCCAAAAATTTAGGAATGTAATTTCCTTGATGCTTGCGGAAGCTACAAAGCCGAACATTGCAGATTATTATACAGTCTTGCGTTGCTTTGATCCGCAGGGTGCGCGCCGGAGGATGGAAAACTATTACCAGACCTTGTTTACACTTTTTGAGTCCATCATTGAAGAAAGAATTCAACAGAAAGATTCTACTGAAGGGGACGTGTTGGACTCATTTCTCAATATCACCAGAGAGGAAAACTCTGAAATAACACGCCATGATGTGTTGCATCTATTTCTGGACTTATTTGTTGCCGGGATAGACACAACATCAGCCACAATAGAATGGACTATGGCAGAGTTGCTACACAACCCAGACAAATTGATGAAAACTAGGAAGGAACTTCAACAAGTCCTTGGGAAAAATGGAGAACCTAAAGATTCAGATATCACTAAGCTCCCTTACCTACAGGCAGTTGTGAAAGAAACCCTTAGATTGCACCCATCAGCCCCTATACTAGTCCACAAATCAGTGGCTGAGGTAGACATGTGTGGCTTCAGGGTACCCAATGATGCACAAGTTCTGATTAATGTGTGGAGCATGGGACATGACTCAAGAATTTGGACTGACCCAAATTTGTTTCTACCTGAAAGGTTTTTAGAAAATGAAGAGGATTTCAGAGGAGAAGATTTGGGATTCATCCCTTTTGGAGCTGGTAGAAGAATGTGTCCTGGTATTCCACTTGCCTACAGAGTTGTTCATACCATGCTCGCAACACTCCTGTACCATTTTGATTGGAAGTTAGCAGATGGGCAAAAACCAGAAGCCATGGACATGGAAGAAAAATTTGGCATTACATTACACAAGGTCAAGCCTCTCATGGCTATTCCAGTCAAAGAATAG 1488 0.422 MDYLKFIPLISFVYACIHILFSSLSSKNTKCPKLPPGPPCYPIIGNILQLGTFKLHQALTKLSKKYGPIMTVRIGTITTVVISSPTIAKAALHKHDQDLANRLIPDSVQALSHDKASLIFMPVSAKWKIYRKICATTIFSSQKLDSTQSLRREKLRELLAYLQECCKKGEAIDIGETAFTTVLNSISNTLFSTDMASYTSGSSQKFRNVISLMLAEATKPNIADYYTVLRCFDPQGARRRMENYYQTLFTLFESIIEERIQQKDSTEGDVLDSFLNITREENSEITRHDVLHLFLDLFVAGIDTTSATIEWTMAELLHNPDKLMKTRKELQQVLGKNGEPKDSDITKLPYLQAVVKETLRLHPSAPILVHKSVAEVDMCGFRVPNDAQVLINVWSMGHDSRIWTDPNLFLPERFLENEEDFRGEDLGFIPFGAGRRMCPGIPLAYRVVHTMLATLLYHFDWKLADGQKPEAMDMEEKFGITLHKVKPLMAIPVKE* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3344 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Lja3g3344 495 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Lja3g3344 495 SUPERFAMILY Cytochrome P450 35 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3344 495 Pfam Cytochrome P450 35 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3344 495 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 492 - -
Lja3g3344 495 Gene3D Cytochrome P450 20 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3344 495 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3344 495 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3344 495 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3344 495 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 492 - -
Lja3g3344 495 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3344 495 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3344 495 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3344 495 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3344 495 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3344 495 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3344 495 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3344 Lja-Chr3 65871713 65874095 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3344 9 495 Cytochrome P450 AT2G45550 44.266 2.62e-159 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3344 - - lja:Lj0g3v0020129.1 665.996