Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3343 ATGGACTACATGAAATTCATCCTACTAATTTCCTTTCTATATGCAGTCATCCACATCCTATTCTCCAGCCTTAACAGAAAAAACACAAAATCTCCCAAACTCCCACCAGGTCCTCCCTGTTATCCATTAATTGGAAACATATTGCAACTTGACACATCCAATCTTCCCCAATCACTAAGCAAACTCTCCCAAAAATATGGACCAATCATGACAGTTAAGGTAGGCACCATCAAAACTGTTGTAATTTCCTCCCCAACCTTAGCCAAAGAAACACTTCACAAAAATGGGCCAGCCTTGAACACCAGATTCACACCTGATTCTGTCAAAGCACTCTCACATGAAGAAGCTTCAGTTCTATACATGGCTGTTTCACCAAAATGGAATGCCTTTAGAAAAGTTTGTGGCACCAAGATATTCTCTTCTCAAAACCTTCATTCCTCTCAATCCCTTCGCAGAGAGAAACTCAAGGAGCTGATTCTTCACTTGAAAGAAAATTGCCGAGAGGGTAAAGGTGTTGATATTGCTGATGCTACGTTTACTACAGTGCTGAACTCAATGTCAAACACATTTTTTTCAGTTGATTTTGCTCGCTATTGCTCTGTTTCTTCTAAGAAATTCAGGGATGTGATTTCGAGTGTGCTGGTGGAAACTTCAAAGCCTAATATTGCAGATTATGGTTCAATTTTTAGTAGATTTGATCCGCAGGGAGCAAGAAGAAGGATGAGAAGCTATTACCAGGTTTTGCTTGCAGATTTTGAGTCTATCATTGAAGAAAGGCTTCAGAAGAAAGATCCAATTGAAGGAAGTGATGTGCTGGACTCGCTTCTTGAGTACACTCGGAAGGAAAAGTCTGAGTTGACTTGCAATGATCTGTTACATCTGTTTCTGGACTTATTCATTGCTGGGTTGGATTCAACATCATCCACTGTAGAATGGGCATTGGCAGGGTTGCTACAGAACCCAGAGAAGTTGAAGAAAACCATGAAGGAACTTCAACAAGTCCTTAGCAAAGATGGAGAACTTACAGATTCAGATATTAACAAGCTCCCTTATCTACAGGCTGTTGTTAAAGAAACCCTTCGGTTGCATCCACCAGGCCCCTTACTAGCCTACAAATCAGTGGCTGAAGTAGAAATTTGTGGCTTCAGGCTACCCAAAGATGCAACTGTTCTTGTGAATGTTTGGGGAATGGGTCATGACTCAAGCATTTGGACTGATCCAAATTTGTTTCTACCTGAAAGGTTTTTAGAAGGTGAGGACAATTTGAGAGAAGATATAGGATTCAACCCTTTTGGAGCTGGTAGAAGAATATGTCCTGGCGTTCCATTTGCTCATAGGGTTGTGCATACCATGCTGGCAACACTCTTGTACCATTTTGATTGGAAGCTTGCAGATGGGCAAAAATCAGAAGCCATGGACATGACTGAAAAATTCATGGTTACTTTAAGCAAAGGAAAGCCTCTCATGGCTATTCCGGTCAAAGAATGA 1488 0.4106 MDYMKFILLISFLYAVIHILFSSLNRKNTKSPKLPPGPPCYPLIGNILQLDTSNLPQSLSKLSQKYGPIMTVKVGTIKTVVISSPTLAKETLHKNGPALNTRFTPDSVKALSHEEASVLYMAVSPKWNAFRKVCGTKIFSSQNLHSSQSLRREKLKELILHLKENCREGKGVDIADATFTTVLNSMSNTFFSVDFARYCSVSSKKFRDVISSVLVETSKPNIADYGSIFSRFDPQGARRRMRSYYQVLLADFESIIEERLQKKDPIEGSDVLDSLLEYTRKEKSELTCNDLLHLFLDLFIAGLDSTSSTVEWALAGLLQNPEKLKKTMKELQQVLSKDGELTDSDINKLPYLQAVVKETLRLHPPGPLLAYKSVAEVEICGFRLPKDATVLVNVWGMGHDSSIWTDPNLFLPERFLEGEDNLREDIGFNPFGAGRRICPGVPFAHRVVHTMLATLLYHFDWKLADGQKSEAMDMTEKFMVTLSKGKPLMAIPVKE* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3343 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Lja3g3343 495 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3343 495 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3343 495 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3343 495 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 494 - -
Lja3g3343 495 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 494 - -
Lja3g3343 495 Pfam Cytochrome P450 35 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3343 495 SUPERFAMILY Cytochrome P450 35 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3343 495 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3343 495 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3343 495 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3343 495 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3343 495 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3343 495 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3343 495 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3343 495 Gene3D Cytochrome P450 19 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3343 Lja-Chr3 65862091 65864483 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3343 6 495 Cytochrome P450 AT2G45550 41.800 3.33e-136 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3343 - - lja:Lj0g3v0020129.1 948.347