Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3325 ATGGCTAAACCAGAAAATTCAAAATCTGGGTGCTTCTCTGGTTTTCTTCGAGTGCTTCTTTGTGCTGGAAGTGAAACTAGTCCTCCAGTGTATCCATCAGAACATGCTGATGAACCAGAAGTAGAGCATCAAACCAAAGATAGGAAACCTGTTCATGCTGCAACTACCCCTGGAGTGGTGGCAAGGTTGATGGGGTTGGATTCACTTCCAAGCACCAAATGGGTAGTGAAAGGAGCCACCCCAGATTTAGTTCCACGAAGCAGGTCAGTAAATTTTGTTGATTACTTGCTGGAGTTTGATCCAAACCATCTCAACAACCATCGCCGTGTGAAAACCTCATCATCATTCCGAGAAGTTCCTGCATTGGTTCAGAGACAACAAAAATGTGATATTTTTGTGCTTGAGAGTGATTACAATGCGAGTAAAGTTCAAGAAGAACGATATAATCAAGTGGAATCAAGGGAAGAGACAGGGGAGTTGAAACAGAGGAGGAAACAGGGGAAAAAACAGGGGAGTAAACAGGGGAGTAAGAGCAAGATCAAAGAAACTGCTGTGAGAGAGAGGGTGAGTGTGAAGAAGGAGAGGAATAATCAAGGGAAGAGCAAGAAAATTTCCAAATTGAAGAATGAACCGAGAAGGGTTCCTTCTTCCAAGCAAAGCTCAAAGGTTCGAAATCACAATGAAGCTAGAGATTTTTCTCATGTTTCCTCTAGCTCCAAGAGCTGTTCTTGTAGATTCAATGGTGATTGTTCAAGCTCAGGTTCTACTTCTAGCTCTTTGTTGCTGAAGAGGAACAATAAAGGGTATGTGGAACCAAAAATCAGAAACAACATGAGAAATCAGCAGTCACCAAAGAAGGTAGAAGCAGAACACAGCTCAGAAAATCTGAGTCCTGTTTCAGTTCTTGATATCAATGACTACCCTTTCCTCTATGGAGCTGAATTTCTAGATGGCACAAGCACCATAGCTTCTTCAAAGCCAAAGTGGAAATCTTCATTATTGTTGCCACTGTTCCTGGAAGATGGAGTTGAAGAGAGAAAGAACAATGATAAATGTTTAGCCTACACAGATTCCAACAGCGAAGCAGAGTATTTCTCAGAATTGATGATGAAGGTTTGCACTTTGGTAGAAAAGGATATTAGGGAGTCAGATTGCACATTGAAGACAGAAAACTTTGAGGCAATATGTTTGGAGTTTGAGCACAAAATTTTCGACCATTTATTATACGAGGTGGTCAATGAAATTGTGGAACTTTCTTGTTGA 1263 0.4117 MAKPENSKSGCFSGFLRVLLCAGSETSPPVYPSEHADEPEVEHQTKDRKPVHAATTPGVVARLMGLDSLPSTKWVVKGATPDLVPRSRSVNFVDYLLEFDPNHLNNHRRVKTSSSFREVPALVQRQQKCDIFVLESDYNASKVQEERYNQVESREETGELKQRRKQGKKQGSKQGSKSKIKETAVRERVSVKKERNNQGKSKKISKLKNEPRRVPSSKQSSKVRNHNEARDFSHVSSSSKSCSCRFNGDCSSSGSTSSSLLLKRNNKGYVEPKIRNNMRNQQSPKKVEAEHSSENLSPVSVLDINDYPFLYGAEFLDGTSTIASSKPKWKSSLLLPLFLEDGVEERKNNDKCLAYTDSNSEAEYFSELMMKVCTLVEKDIRESDCTLKTENFEAICLEFEHKIFDHLLYEVVNEIVELSC* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3325 420 PANTHER ALC-INTERACTING PROTEIN 1 1 419 - -
Lja3g3325 420 PANTHER OS05G0128300 PROTEIN 1 419 - -
Lja3g3325 420 MobiDBLite consensus disorder prediction 27 51 - -
Lja3g3325 420 MobiDBLite consensus disorder prediction 273 294 - -
Lja3g3325 420 MobiDBLite consensus disorder prediction 147 165 - -
Lja3g3325 420 MobiDBLite consensus disorder prediction 35 50 - -
Lja3g3325 420 MobiDBLite consensus disorder prediction 144 243 - -
Lja3g3325 420 Pfam DUF761-associated sequence motif 55 73 IPR032795 -
Lja3g3325 420 MobiDBLite consensus disorder prediction 175 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3325 Lja-Chr3 65546128 65547934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3325 1 415 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 25.745 2.38e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3325 - - mtr:MTR_4g015650 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3325 3 65546128 65547934 Lja3g3325 3 65546128 65547934 ECH