Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3317 ATGGCAACCCAAGTGAACCATCCGTTTAGAGGTTCTATTCTGAAGCACAAGACACAACCAGAGGCTCCTTTCACCACCGCAACCACAGTAAGAACCACGAGATTTCAAGTCATCAATGCAGCATCCTCCACTGGCAGCAGCGCCAGGCAGCTCATAGAGTCCGGCACCATCAGGACTATATCACCAAAAGATGCTTCCACAGCCTTGAATTCAGAGGGCTTCGTTCTCCTTGATGTGAGGCCAAACTGGGAGATAGAGAAGGCACGAGTGAAGGGGTCTCTGCACGTGCCAATCTTTGTGGAAGATAAGGATAATAGTCCCATTACCCTGCTTAAGAAGTGGGTGCATTTTGGTTACATTGGCTTGTGGACTGGCCAATACTTTACAACCTTGAACTCTGAGTTCGTTAGTCAAGTGGAAAATGCCATTCCTAGAAAGGACACCAAGCTTCTTGTGGCATGTGGTGAAGGACTGAGGTCAATCACAGCAGCTACAAAGCTGTATAATGGAGGTTACAGAAATCTGGGATGGTTAGGTGGAGGTTTTAATCGTTCAAAGGACAATGATTTCCCAGAAGTAGAAGGAAAAGAGAAGTTGCAGTATGCCACAATTGGGGGAGCCTCTTACTACTTCCTTCAGTTGCTGATACTTCTACAGGGCAAAGGCTGA 669 0.4694 MATQVNHPFRGSILKHKTQPEAPFTTATTVRTTRFQVINAASSTGSSARQLIESGTIRTISPKDASTALNSEGFVLLDVRPNWEIEKARVKGSLHVPIFVEDKDNSPITLLKKWVHFGYIGLWTGQYFTTLNSEFVSQVENAIPRKDTKLLVACGEGLRSITAATKLYNGGYRNLGWLGGGFNRSKDNDFPEVEGKEKLQYATIGGASYYFLQLLILLQGKG* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3317 222 Pfam Rhodanese-like domain 61 184 IPR001763 -
Lja3g3317 222 SMART rhod_4 60 191 IPR001763 -
Lja3g3317 222 ProSiteProfiles Rhodanese domain profile. 70 194 IPR001763 -
Lja3g3317 222 CDD RHOD 64 183 - -
Lja3g3317 222 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 1 219 IPR044614 -
Lja3g3317 222 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 51 196 IPR036873 -
Lja3g3317 222 Gene3D - 57 203 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3317 Lja-Chr3 65339876 65341383 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3317 31 210 Sulfurtransferasese or Rhodanese AT3G08920 60.000 1.07e-80 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3317 - - gmx:100795945 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3317 3 65339876 65341383 Lja3g3317 3 65339876 65341383 ECH