Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3305 ATGGCAACCGCCACCGCAACCGCCGCCGCCACCTCATCCTTCATCGGAACACGCCTCCGCGACGCGCAGCCGAGCCTAGGCCGTGTGCAAGCGAGATTCGGATTCGGGATCGGGAAGAAGAAGGCCGCACCGAAGAAGGTAGCGAGACCAGGTCCAGGTACCGAACGGCCGCTGTGGTACCCCGGAGCGAAGGCGCCAGAGTGGCTCGACGGGAGCTTGGTCGGTGACTACGGGTTTGATCCGTTTGGGCTTGGGAAGCCGGCGGAGTACTTGCAGTTTGATCTGGATTCGTTGGACCAGAATCTGGCGAAGAATTTGGCCGGAGATGTGATCGGAACGAGGACGGAGTTTGAGGACGTGAAGTCGACGCCGTTTCAGCCGTACAGTGAGGTGTTTGGGTTGCAGAGGTTTAGGGAGTGCGAGCTTATTCATGGAAGGTGGGCCATGCTCGCCACGCTTGGTGCTCTTACCGTTGAGTGGCTCACCGGAATCACCTGGCAAGACGCCGGCAAGGTGGAGCTTGTAGAAGGGTCATCATACCTTGGTCTACCACTCCCATTCTCAATCACCGCATTGATTTGGATTGAAGTTTTGGTGATTGGGTACATTGAGTTCCAAAGAAACGCTGAGCTTGACCCTGAGAAGAGGCTGTACCCAGGTGGCAGCTTCTTCGACCCTCTCGGCTTGGCCGCGGACCCTGAGAAGAAGGCCACCCTTCAATTGGCAGAAATCAAGCATGCTCGTCTTGCCATGGTTGCTTTCCTTGGCTTTGCTGTCCAAGCTGCTGCCACTGGCAAAGGCCCTCTTGATAACTGGGCTACCCATTTGAGTGACCCTCTTCACACCACCATCATTGATACCTTCTCATCCTCTTGA 876 0.5651 MATATATAAATSSFIGTRLRDAQPSLGRVQARFGFGIGKKKAAPKKVARPGPGTERPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTRTEFEDVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGLPLPFSITALIWIEVLVIGYIEFQRNAELDPEKRLYPGGSFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLDNWATHLSDPLHTTIIDTFSSS* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3305 291 Pfam Chlorophyll A-B binding protein 65 261 IPR022796 -
Lja3g3305 291 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 4 291 - -
Lja3g3305 291 Gene3D Chlorophyll a/b binding protein domain 59 291 - -
Lja3g3305 291 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 291 IPR001344 GO:0009765|GO:0016020
Lja3g3305 291 SUPERFAMILY Chlorophyll a-b binding protein 53 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3305 Lja-Chr3 64851506 64853851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3305 15 291 Chloroplast and Mitochondria Gene Families AT3G08940 83.453 9.22e-168 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3305 K08915 - gmx:100785180 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3305 3 64851506 64853851 Lja3g3305 3 64851506 64853851 ECH