Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja3g3299 | ATGGAAGGAAAAGATGAAGATGTAAGAGTAGGAGCCAACAGGTACACAGAGAGGAACCCAATAGGAACCGCTGCTCAGTCTCAAGATCAAGATACCAGTAGCAGAGACTACAAAGAGCCTCCCTCAGCACCTTTCTTCGAGCCCGGCGAGCTGTCATCATGGTCCTTCTACAGAGCCGGCATAGCAGAGTTCGTCGCCACGTTCTTGTTTCTTTACATCACCGTGTTAACTGTGATGGGTGTGGCTAAATCCAAGAGCAAGTGTTCCACTGTTGGTGTCCAAGGCATAGCTTGGTCATTTGGTGGAATGATCTTTGCTCTTGTCTATTGCACTGCTGGCATCTCAGGGGGTCACATAAACCCAGCAGTGACATTTGGGCTGTTCTTGGCACGCAAGCTATCTTTGACCAGAGCAGTGTTTTACATAATTATGCAGTGCTTGGCAGCTATATGTGGCGCGGGTGTGGTGAAAGGGTTCCAACCACACCAATATGAGAGGCTTGGTGGTGGTGTAAACACTCTGAGTAAAGGATATTCCATAGGTGATGGCCTTGGAGCAGAGATTGTTGGCACATTTGTGCTTGTTTACACTGTGTTCTCTGCTACTGATGCCAAGCGAAACGCACGAGACTCGCACATTCCTATTTTGGCACCACTACCCATTGGTTTTGCTGTGTTTCTGGTGCATTTGGCTACAATTCCCATCACTGGAACTGGTATCAACCCTGCCAGAAGTCTAGGTGCAGCCCTTATTTTCAACAAGGACCAAGCGTGGGATGACCATTGGATATTTTGGGTAGGGCCATTCATTGGGGCAGCACTTGCAGCTCTGTATCATCAGATAGTGATCAGGGCCATTCCCTTCAAGTCAAAGTGA | 876 | 0.4829 | MEGKDEDVRVGANRYTERNPIGTAAQSQDQDTSSRDYKEPPSAPFFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVAKSKSKCSTVGVQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIIMQCLAAICGAGVVKGFQPHQYERLGGGVNTLSKGYSIGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHIPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIFNKDQAWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKSK* | 292 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja3g3299 | 291 | PRINTS | Major intrinsic protein family signature | 262 | 282 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Lja3g3299 | 291 | PRINTS | Major intrinsic protein family signature | 100 | 124 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Lja3g3299 | 291 | PRINTS | Major intrinsic protein family signature | 137 | 156 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Lja3g3299 | 291 | PRINTS | Major intrinsic protein family signature | 186 | 204 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Lja3g3299 | 291 | PRINTS | Major intrinsic protein family signature | 222 | 244 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Lja3g3299 | 291 | PRINTS | Major intrinsic protein family signature | 58 | 77 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Lja3g3299 | 291 | Pfam | Major intrinsic protein | 50 | 279 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Lja3g3299 | 291 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 1 | 291 | IPR034294 | - | |
Lja3g3299 | 291 | Gene3D | Glycerol uptake facilitator protein. | 43 | 290 | IPR023271 | - | |
Lja3g3299 | 291 | SUPERFAMILY | Aquaporin-like | 51 | 284 | IPR023271 | - | |
Lja3g3299 | 291 | TIGRFAM | MIP: MIP family channel proteins | 62 | 279 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Lja3g3299 | 291 | CDD | MIP | 58 | 282 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Lja3g3299 | 291 | PANTHER | PLASMA MEMBRANE INTRINSIC PROTEIN | 1 | 291 | - | - | |
Lja3g3299 | 291 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Lja3g3299 | 291 | ProSitePatterns | MIP family signature. | 118 | 126 | IPR022357 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja3g3299 | Lja-Chr3 | 64617692 | 64619713 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja3g3299 | 1 | 291 | Major Intrinsic Protein MIP | AT3G61430 | 82.818 | 3.49e-175 | 483 |