Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3284 ATGGCTTTGGCACCGGACGTTCCAAAAATGGGTACTGTACTCTCGGGTCGCATGCTCTTGCAAGGCATCAACCACCACTCTTATTACTCTATTCCCAGATCTTCAAGCATCACGCAGGAAGGTAAGTTTGGAGAAGCTTTTGATGATTTTGTTCAAAGAATCACGGTGGGGGAAGACAAATTGAAGACTTGGAGGCGAGCTATTAGAAAAGCTAGCAAACTTCCAGAATTTATCTCGGTAGATTCAAGCCCCGCCGAAAGCATGGAAATCAAGAGAGTGGTTAACCGTATTATGGTAGATCTGCGAAACTACAAAAACGGGCACCTTGCTGAGCATCAAGTGGGGGTAGAATCACGTGTGCAAGATGTGATTGGACTACTGAACAGCTGTCAATCAGAACATCCTCAACTACTAGGGATATGGGGAATGGCAGGAATAGGTAAAACATCCATTGCTGAAGCCGTTTATAATCAAATTGGTGGTGGTTTTGAGGCTAAGAGCTTCCTCCGAAATGTCAGGGAAGTTGCCAAACGACATAATGGCTTAGTTTCTTTACAACAACAGCTTCTTTTTCAAATCTTCAAAACTAAAGAAACAAAGATAGGTACAACTGAATCAGGAGAAAAGTTATTGCGGGAAAGACTTCAAGAGAGAAAAATACTTGTTATACTTGACGATGTGAATGATTCTGAGCAACTAAAGGCTTTGTGTGGAAGTGGTGAATGGCCTAGGGACCTTAATGTTTGGAAGGTACAGAGAATTCTGGCAGAGTTGCTTACAGAATATCAAAAGAAGTCTCATTCCCGAAGTAAAACAAATTCTAGAAAAAAAGTTTTGATGATTTACAAGATATGGAGAAAATATTATTCCTTGATATAG 879 0.4073 MALAPDVPKMGTVLSGRMLLQGINHHSYYSIPRSSSITQEGKFGEAFDDFVQRITVGEDKLKTWRRAIRKASKLPEFISVDSSPAESMEIKRVVNRIMVDLRNYKNGHLAEHQVGVESRVQDVIGLLNSCQSEHPQLLGIWGMAGIGKTSIAEAVYNQIGGGFEAKSFLRNVREVAKRHNGLVSLQQQLLFQIFKTKETKIGTTESGEKLLRERLQERKILVILDDVNDSEQLKALCGSGEWPRDLNVWKVQRILAELLTEYQKKSHSRSKTNSRKKVLMIYKIWRKYYSLI* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3284 292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 242 IPR027417 -
Lja3g3284 292 Gene3D - 27 103 IPR035897 -
Lja3g3284 292 Gene3D - 104 256 IPR027417 -
Lja3g3284 292 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 33 242 - -
Lja3g3284 292 Pfam NB-ARC domain 117 236 IPR002182 GO:0043531
Lja3g3284 292 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 33 242 IPR044974 GO:0006952
Lja3g3284 292 PRINTS Disease resistance protein signature 214 228 - -
Lja3g3284 292 PRINTS Disease resistance protein signature 137 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3284 Lja-Chr3 64207638 64209801 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3284 58 239 WRKY Transcription Factor Family AT4G12020 28.261 1.06e-17 81.6