Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3283 ATGTCTTCCTCCACTTGGAAGAATGTGCAGTCCGAGGATCGTGAGCAACTCGAATGGTTAATTTCTTCATTTATGGAAGATTCCTTTTCACAGGAAGATAGACTAAATCCGAATCCGAGGATCCACGATGTGTTCTTGAGTTTCAGAGGGGAAGACACTCGTGCTTCCTTCACTTCACATCTCTATTCCGCTCTTCAAAACGCTGGGATCAAAGTTTTCAGGGACGACGATTCCCTTCCAAGGGGAGATCAAATTTCATACTCACTGCTGAAAGCAATTGAAGAATCTCAGATTTCAGTTATTGTTTTCTCACCAAATTATGCGGATTCTCGGTGGTGTCTGGATGAGTTGAACAAAATAATAAAATGTCACAGAACCATAGGTCAGGTGGTTCTGCCGGTGTTCTACGGTGTCGATCCCTCTGAAGTGCGACGCCAAACTGGTGAGTTTGGGAAAAAATTTCTCAATCTTAAAAACACAATGCCAATGGATGAAGACAATATGTTGCTAAACAATCTGATGCCCCGCTGGAAGCGTTGGAGGGAGGCACTTCGTGAGGCTGGTGGCATTGCAGGGTTTGTTGTCTTAAATTCTAGGAATGAAAGTGAGATTATCGAGAATATTGTTGAAAATGTTACTAGTTTGCTTGACAAGACAGACATGTTCATTGCCGATAATCCAGTGGGCGTTGAATCTCGAGTGCAAGATATGATTCAACTGCTAGACAACCAACAATCAAATGATGTTCTATTACTCGGGGTATGGGGTATGGGAGGAATTGGTAAAACAACCATTGCAAAAGCTATTTACAATAAAATTGGCCGCAATTTTCAGGGTAGGTGTTTCCTTGCAAATATTAGAGAAGCTGGGGAGCAAGATGCTGGACAAGTGCATTTACAAGAACAACTTCTGTTTGATATCTTGAAGAAAACAACCAAGATACATAGCACTGAATCAGGAAAAAATATATTAAAGGATAGACTTTGCAGTAAAAGAGTACTTCTTGTACTTGACGATGTGAATAAATTGGACCAACTGAATGCTTTGTGTGGAAGTCGTGAGTGGTTTGGTTCAGGGAGTAGAATAATCATCACAACCAGAGATCAGCATATACTGAGAGGGAGTAGAGTTGACCAAGTTTACATAATGAAAGAAATGGATGAAAGAGAATCGATTGAGCTTTTTAGTTGGAATGCATTCAAGCAAGCGAGCCCTAAGGAAGATTTTGCTGAAATTTCAAGAAACGTAGTTGAGTATTCTGGGGGATTGCCACTAGCTCTTCAAGTCCTTGGGTCCTATTTGTTTGATAGGGTCGTAACAGAATGGAAGAGTGTATTGGAGAAACTCAGAACAATTCCCAATGACCAAGTACAGAAAAAGTTAAGAATAAGCTATGATGGTTTAAATGATGATAAAGAGAAAGATATATTCCTTGACATAGCTTGTTTCTTAATTGGGATGGACAGAGGTGATGCTATACAAATATTAGATGGCTGCAAACTTTTTGCAGAAATTGGAATAAGTGTCCTTGTTGAGAGAAGTCTTGTAACTGTTGATGATAAGAACAAGCTTGGAATGCATGATTTGCTGCGAGACATGGGAAGAGAAATCATTCGTGAGAAATCACCAAAGGAGCCTGAGGAGCGTAGCAGGTTATGGTTTCATGAGGATGTTATCGAAGTATTATCAGACCAAACTGGAACAAAAGCTATTGAAGGACTGTCTTTGAAGTTGCCAGTTAATAATACAAAATGTTTCAGCACTGAAGCATTTGAGAAGATGAAGAAACTCAGATTGCTTCAACTTGCTGGTGTAAAGCTTGAAGGAGATTTTAAATATCTTTCAAGAAATCTGAGATGGCTGTGTTGGCATGGATTTCCGTTATCTTTCCTACCTAAAAACCTTCGTCAAGAAAATTTAGTTTCCATCATGTTAGAAAACAGCAATATCAAACATGGATGGAAAGATGGCCAGAGGATGGAGATGCTGAAAATTCTGAATCTTAGTCATTCTCAGCATTTGACACAGACCCCAGACTTTTCATGTATGCCTAATCTTGAAAAGCTTGTACTTAGAAATTGTCCAAGCCTGTCTGAGGTTTCCCATAGCATTGGACATCTCAATAAAGTTTTACTGATAAATTTGAAAGACTGTATTAGCCTTCGTAACCTTCCAAGAAGCATCTACAAGTTGAAATCTCTGAAAACCCTCATCCTTTCTGGATGTTTAATGATTGACAAGTTGGAAGAGGACGTGGAACAGATGGAATCTTTGACAACCCTGATTGCAGACAACACTGCTATAACAAGAGTTCCCTATTCATTAGTCAGGTCAAAAAGCATCGGATATATTTCTTTGTGTGGTCATGAAGGATTCTCTCATGATGTGTTTCCTTCTATCATTTGGTCTTGGATGTCACCAACAAATATCCTCTCATCCTTAGTTCAAACATCTGCAGGCATGTCATCTCTGGTTTCTTTAAATGTATCAAATAGTAGTTCACAGGGATTATCATCTATTCCCATGGACCTTCCAAAGCTTCAAAGTCTGTGGATAGAGTCTGGCTCAGAACTTCAACTTTCTCAAGATGCAGAAAGAATTTTGGATGCCTTGTATGCCATGAATTCTTCTAAAGAATTGGAACCAACTGCAACTACATCAGAAGTATCAAATATGAAAACTTCTTCCTTGATGGAATGCAGTTGTCAAGTGCTTGATTCAGGATCAAAAGGTTCCTTGAAATCTCTTTTATTTCAAATGGGAATGAATTGTCAAGCCACCAGTATTCTGAAAGAGAGCATTTTAGAGAATATGGCTGTTGGAGGGTCTGGTGTAAGCTTGCTCCCCGGAGACAATTATCCAGATTGGTCAACCTTCAACTCGGAAGGTTGTTCTGTGATTTTTGAAGTCCCTCAAGTGAATGGGCGTAGTTTGAAGACAATGATGTGTGTTGTCCATTCTTCTACCGCAGATGACATAACATCAGATGGTCTTCAAAATGTGTTGGTGATAAATTGCACAAAGAACACAATTCAGCTCTATAAGAGGAACGCATTAGCCTCCTTTGAAGATGAAGAGTGGCAGAGAGTAGTATCAAATATTGAACCAGGTAACAAAGTAAAGGTGGTGGTTGTTTTTGAGAACGGATTCACTGTGAAGAAGACAACAGTATATCTTGTATATAATGAACCAATTGAGGAGAAAATGGAACCTTGCAGTGCACCATATAAGAATGAAATTGTTTTTGGGGGTGATGAAACTGAATCCGCTGTCGGGAGGAGCTCTGCACAACTGGAGTCAGTGGATGACTTGAAACAAAAACTGAAGAGAAGGAAGTTGCAATAA 3345 0.3946 MSSSTWKNVQSEDREQLEWLISSFMEDSFSQEDRLNPNPRIHDVFLSFRGEDTRASFTSHLYSALQNAGIKVFRDDDSLPRGDQISYSLLKAIEESQISVIVFSPNYADSRWCLDELNKIIKCHRTIGQVVLPVFYGVDPSEVRRQTGEFGKKFLNLKNTMPMDEDNMLLNNLMPRWKRWREALREAGGIAGFVVLNSRNESEIIENIVENVTSLLDKTDMFIADNPVGVESRVQDMIQLLDNQQSNDVLLLGVWGMGGIGKTTIAKAIYNKIGRNFQGRCFLANIREAGEQDAGQVHLQEQLLFDILKKTTKIHSTESGKNILKDRLCSKRVLLVLDDVNKLDQLNALCGSREWFGSGSRIIITTRDQHILRGSRVDQVYIMKEMDERESIELFSWNAFKQASPKEDFAEISRNVVEYSGGLPLALQVLGSYLFDRVVTEWKSVLEKLRTIPNDQVQKKLRISYDGLNDDKEKDIFLDIACFLIGMDRGDAIQILDGCKLFAEIGISVLVERSLVTVDDKNKLGMHDLLRDMGREIIREKSPKEPEERSRLWFHEDVIEVLSDQTGTKAIEGLSLKLPVNNTKCFSTEAFEKMKKLRLLQLAGVKLEGDFKYLSRNLRWLCWHGFPLSFLPKNLRQENLVSIMLENSNIKHGWKDGQRMEMLKILNLSHSQHLTQTPDFSCMPNLEKLVLRNCPSLSEVSHSIGHLNKVLLINLKDCISLRNLPRSIYKLKSLKTLILSGCLMIDKLEEDVEQMESLTTLIADNTAITRVPYSLVRSKSIGYISLCGHEGFSHDVFPSIIWSWMSPTNILSSLVQTSAGMSSLVSLNVSNSSSQGLSSIPMDLPKLQSLWIESGSELQLSQDAERILDALYAMNSSKELEPTATTSEVSNMKTSSLMECSCQVLDSGSKGSLKSLLFQMGMNCQATSILKESILENMAVGGSGVSLLPGDNYPDWSTFNSEGCSVIFEVPQVNGRSLKTMMCVVHSSTADDITSDGLQNVLVINCTKNTIQLYKRNALASFEDEEWQRVVSNIEPGNKVKVVVVFENGFTVKKTTVYLVYNEPIEEKMEPCSAPYKNEIVFGGDETESAVGRSSAQLESVDDLKQKLKRRKLQ* 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3283 1114 ProSiteProfiles TIR domain profile. 40 216 IPR000157 GO:0007165
Lja3g3283 1114 SMART till_3 41 190 IPR000157 GO:0007165
Lja3g3283 1114 Gene3D - 385 469 IPR042197 -
Lja3g3283 1114 CDD AAA 228 368 - -
Lja3g3283 1114 SUPERFAMILY Toll/Interleukin receptor TIR domain 34 193 IPR035897 -
Lja3g3283 1114 SUPERFAMILY "Winged helix" DNA-binding domain 456 562 IPR036390 -
Lja3g3283 1114 Gene3D Ribonuclease Inhibitor 722 919 IPR032675 -
Lja3g3283 1114 SMART AAA_5 248 387 IPR003593 -
Lja3g3283 1114 Gene3D - 38 222 IPR035897 -
Lja3g3283 1114 Gene3D Ribonuclease Inhibitor 559 721 IPR032675 -
Lja3g3283 1114 Gene3D - 223 382 IPR027417 -
Lja3g3283 1114 Pfam NB-ARC domain 231 462 IPR002182 GO:0043531
Lja3g3283 1114 SUPERFAMILY L domain-like 575 916 - -
Lja3g3283 1114 Pfam TIR domain 42 215 IPR000157 GO:0007165
Lja3g3283 1114 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 48 1061 - -
Lja3g3283 1114 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 48 1061 IPR044974 GO:0006952
Lja3g3283 1114 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 480 IPR027417 -
Lja3g3283 1114 PRINTS Disease resistance protein signature 327 341 - -
Lja3g3283 1114 PRINTS Disease resistance protein signature 251 266 - -
Lja3g3283 1114 PRINTS Disease resistance protein signature 658 674 - -
Lja3g3283 1114 PRINTS Disease resistance protein signature 420 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3283 Lja-Chr3 64201023 64206741 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3283 36 775 WRKY Transcription Factor Family AT4G12020 32.372 1.40e-92 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3283 - - lja:Lj0g3v0331109.1 1620.14