Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3282 ATGGTCTCAGACTCACTAAAGCGAGCTATCAGCAAATCTATAATTTCTATAGTGGTTTTGTCAAAACATTATGCTAATTCAAAATGGTGTATGCTAGAGTTGCTTGAAATAATGAAAGAACGCAGAACCACAGGGCTGGTGGTTGTTCCGGTGTTTTATGAGGTAGATCCCTCAGATGTGCGTCATCAGACAGGTGAGTTTGGAAAAGCTTTTGAAGATCTTATAAAAACAACCTCACTAGATGAACAAGGCATCGTAAGGAATTGGAGGACAACACTCCTTGAAGTTGGTGGCATAGCAGGTGTTGTCATCATAAACTCCAGCTCGCATTCAAGATGTCATTCAACTATTGAAAAGCCAACAATCAGAGATCCTCTACTACTTGGGATATGGGGGATGGGAGGGTTGGGTAAAACAACCATTGCCAAAGCTGTGTATAATCAAATTCGTCGTGATTCTGAGGCTAAGAGCTTCCTCCTAAATGTTAGGGAAGTTTGCGAACAAAATAATGGCTTAGTTACTTTACAACAGAAGCTTCTTTCTGATATCTGCAAAACCACCAAGACAAAGATAGATAATGTTGAATCAGGAAAAGTAGAATTGAAGAGAAGACTTGGCCAAAAGAAAATATTTCTTGTGCTCGACGATGTCAATAAATTGGACCAACTGAGGGCTTTGTGTGGAAGTCGTGAATGGTTTGGCCAAGGAAGTAGAATTATCATCACAACAAGAGATGTAAATATAGTTCAAAAGGAGTTTGGAGTTGAAGTTGTATATAGAATAAAAGAAATGGACAACAAGGAATCTCTTGAGCTTTTTAGTTGGCATGCATTTAAGCAACCAAGTCCTGAAGATGGTTTCACTGATCTTTCTAGCGATGTAGTTAAATACTGTGGGGGGTTGCCGCTAGCTCTTGAAGTAATTGGGTCCTTTTTGTTGACTAGGAGGAGGATAACAGAGTGGAAGAGTGTACTGGAGAAACTCAAAATGATTCCCAATAATGAAGTGATGGAGAAACTTCAAATAAGTTTTGATGGTTTAAGTGATGATGATATTAAAGAAGTATTCCTTGATATAGCTTTCTTCTTTATTGGGATGGACCAAAATGATGTGATTAAGATATTAAATGACTGTGGGAATTTTGCAGAAATTGGAATAAGTGTCCTCGTACAACAATGTCTTGTAACTATTGATAGGAAGAACAGGATCAGAATGCATGATTTGCTACGTGACATGGGAAGAGAAATCGTCCGCAAGAGATCAGCTGAAGGGGGCAAAGAGCCTAGTAGATTATGGCGCTACGAGGATGTGCAGCGTGTATCATCAAAATATACTAGAACAGTGGATGTTCAGGGACTGACTTTGAAGTGTCCAGAAATGGATACAACTTATAATTTGGATGCCAAAGCATTTGAGAAGATGGATAAACTTAGATTGCTTCAACTTGCTGGCGCACAACTTGATGGAGACTATAAGTATCTTTCAAGAGATCTTAGATGGCTTTGCTGGCATAGATTTCCTTTAAAATGTACACCAGCAGACTTTCATCAAGAAAGTTTAGTTGCTATTGACTTCAAATATTCCAATCTGGTACAAGTTTGGAGGAAGTCTCAGATGCTAATGAAGCTGAAATTTCTCAATCTCAGTCATTCTCCTAACTTGAGACAAACTCCAGACTTTTCAAACTTGCCAAATCTTGAAAAGTTAGTACTAAAAGATTGTACCAGTTTGTCTTCAATTTCTCCTACTATTGGAAATCTCAATGAACTGCTTCTTTTAAGTTTGAAAAACTGTACAAGCCTTCGCCAACTTCCAAGAAGCATCTATAAGTTGAAGTCATTAAAAACCCTCATTTTGTCTGGGTGCTCAAAAATTGACAAGTTGGAAGAGGATATGGAACAAATGGTATCTTTAACCACCCTGGTTGCAGATAACACTGGTATAACAAGCGTTCCCTTTGCTGTAGTGAGATCAAAAAGTATTGGATATATATCTCTGTGCGGCTATGAAGGATTCTCACGAGATGTATTTCCTTCAATTATACAGTCTTGGATGTCTCCAGCTAATAATACTTCATCCCAAGTTCAAACATCTGTTGTGGGTATGTCATGTCTTGATCTCTTGGATGAACAGAACAGTAGTTTCTATGGTCTATTATATGCTCTAAAAGATCTTCAGAAGCTTCAACGCCTATGGGTGAAGTGTGACTCAGATGTTCAGCTGAATCAAAGTGTAGAGAGGATTTTGGATACCTTAAATACCACAATTTGCGGGGAATTAGAAGCAACCCCAAGCACATCTCAAGTCTCAACCAATAAGTCCACTTTAGTTGATTGGCACAACCAAGTTCGAATTTCAAGGTCAAAAAAATCATTGACATCTCTTCTGATACAAATGGGAATGAACTGCAGTGTTAAAATGTCTCCCATCGAGTTTGGTTTACTTCCGAATAACAACTATCCTGATTGGCTAACATTCAATAGTGAATGTTCTTCTGTGATTTTCAAAGTCCCTCAAGTGGATGGGCGCAACTTGAGGGCAATAATGTGCATTATTTATTCTTCTTCCCCAGACAAAATCATATCAGAAGGCCTGAAAAATGTGATGTTGATAAATTACACAAAAAACACCATTCAGCTCTATAAGAAAGATGCATTTGACTCCTTCAATGAAGAGGAGTGGCAGAAAGTAGTATCAAATATAGAACCTGGTAACAAAGTGAAGGTGGTTTTTGTTTTTGAGAACGGTTTCACTGTGAAGAATACAACAATTTATCTCATATATGATGAACCAATTGATAAAAAGGCAGAGCACTACCATGAGCCAGATAAGAATGCTGTTGTTTCCAGCGGTGATGAAAATGTAAGTATTAATGGTCTGAGTTTATGCACATTTGAAATGAATGGAATAAACCATTCCAATATCGATGGGTTGGTGCAAATCTTGAGGCTTAAGGAATCAATTCTGAGTATTTCAAATTTCTGGAAGTCTTTAGACAAATTTCCAAAGCTAGAGGCAGAAATTGATTGA 3030 0.3789 MVSDSLKRAISKSIISIVVLSKHYANSKWCMLELLEIMKERRTTGLVVVPVFYEVDPSDVRHQTGEFGKAFEDLIKTTSLDEQGIVRNWRTTLLEVGGIAGVVIINSSSHSRCHSTIEKPTIRDPLLLGIWGMGGLGKTTIAKAVYNQIRRDSEAKSFLLNVREVCEQNNGLVTLQQKLLSDICKTTKTKIDNVESGKVELKRRLGQKKIFLVLDDVNKLDQLRALCGSREWFGQGSRIIITTRDVNIVQKEFGVEVVYRIKEMDNKESLELFSWHAFKQPSPEDGFTDLSSDVVKYCGGLPLALEVIGSFLLTRRRITEWKSVLEKLKMIPNNEVMEKLQISFDGLSDDDIKEVFLDIAFFFIGMDQNDVIKILNDCGNFAEIGISVLVQQCLVTIDRKNRIRMHDLLRDMGREIVRKRSAEGGKEPSRLWRYEDVQRVSSKYTRTVDVQGLTLKCPEMDTTYNLDAKAFEKMDKLRLLQLAGAQLDGDYKYLSRDLRWLCWHRFPLKCTPADFHQESLVAIDFKYSNLVQVWRKSQMLMKLKFLNLSHSPNLRQTPDFSNLPNLEKLVLKDCTSLSSISPTIGNLNELLLLSLKNCTSLRQLPRSIYKLKSLKTLILSGCSKIDKLEEDMEQMVSLTTLVADNTGITSVPFAVVRSKSIGYISLCGYEGFSRDVFPSIIQSWMSPANNTSSQVQTSVVGMSCLDLLDEQNSSFYGLLYALKDLQKLQRLWVKCDSDVQLNQSVERILDTLNTTICGELEATPSTSQVSTNKSTLVDWHNQVRISRSKKSLTSLLIQMGMNCSVKMSPIEFGLLPNNNYPDWLTFNSECSSVIFKVPQVDGRNLRAIMCIIYSSSPDKIISEGLKNVMLINYTKNTIQLYKKDAFDSFNEEEWQKVVSNIEPGNKVKVVFVFENGFTVKNTTIYLIYDEPIDKKAEHYHEPDKNAVVSSGDENVSINGLSLCTFEMNGINHSNIDGLVQILRLKESILSISNFWKSLDKFPKLEAEID* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3282 1009 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 359 IPR027417 -
Lja3g3282 1009 Pfam NB-ARC domain 126 330 IPR002182 GO:0043531
Lja3g3282 1009 Gene3D - 2 95 IPR035897 -
Lja3g3282 1009 PRINTS Disease resistance protein signature 204 218 - -
Lja3g3282 1009 PRINTS Disease resistance protein signature 298 312 - -
Lja3g3282 1009 PRINTS Disease resistance protein signature 609 625 - -
Lja3g3282 1009 PRINTS Disease resistance protein signature 127 142 - -
Lja3g3282 1009 SMART till_3 1 99 IPR000157 GO:0007165
Lja3g3282 1009 Pfam TIR domain 2 105 IPR000157 GO:0007165
Lja3g3282 1009 Gene3D - 263 348 IPR042197 -
Lja3g3282 1009 Gene3D - 99 254 IPR027417 -
Lja3g3282 1009 Gene3D Ribonuclease Inhibitor 431 776 IPR032675 -
Lja3g3282 1009 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 82 IPR035897 -
Lja3g3282 1009 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 928 IPR044974 GO:0006952
Lja3g3282 1009 SUPERFAMILY L domain-like 404 735 - -
Lja3g3282 1009 ProSiteProfiles TIR domain profile. 1 96 IPR000157 GO:0007165
Lja3g3282 1009 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 2 928 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3282 Lja-Chr3 64175158 64182691 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3282 117 651 WRKY Transcription Factor Family AT5G45050 31.915 1.36e-68 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3282 - - lja:Lj0g3v0297389.2 1464.9