Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3281 ATGTTTGGAAGGTACAGAGATGTCTGGGAGAGTTTGTTACATAATATCAAAAGAAGTCTCATTCCTGAAGTAAGAAAAATTCTGGAAAGAACTTTTGATGATTTAGAAGATATGGAGAAAATAGTATTCCTTGATATAGCATGCTTCTGTATCGGGATGGACCTAAATGATGTAATATCGATGTATACATCTCCAACAGAGGTTGCAATAAGTGTTCTTCAAGACAAAAGCCTTGTAACTGTTGATGAGAACTACAAGCTTGGAATGCATGTTCTGCTGCAACAAATGGGAAGAGAAATACAAAAGGAGGAGTCGAAGAAAGTGGTTGATCAGCCAAAGATCTACGATGTGTTCTTGAATTTCAGAGGGGAAGACAGTCGTGCAAAATTCATTTTACATCTCTATGCCTCTCTTCAAAATGCCGGGATTAATGTTTTCAGAGATGATGATGAGATTCAACGGGGAGATACGATCTCCGTCTCACTACTGCGAGCTATCAGAAATTCTAGAATTTCTATCGTTGTTTTTTCAAAATATTATGCTAATTCAAAATGGTGCATGCTAGAGTTGGAGAACATTATGGAAACTCGCAGAACCATGGGTCTGGTGGTTGTGCCAGTTTTCTATGAGGTAGATCCCTCAGATGTACGTCATCAGAGAGGTGATTTTGGAAAAGCTTTTGAGGATCTTATAACAAAAACCTCGGTGGATAAATTCATGGTGAAGAATTGGAGGACAGCTCTCCTTGAAGTTGGTGGCATGGCAGGTCTTGTCATCATAAACTCCAGGAATGAAAGTGAGGATATCATGAAAGTAGTTGAAGATGTTACCGATTTGCTAGGCAGGTCAGACATTATCGTTGCTGACCACCCAGTAGGGGTTGACGCTCGCGTTCAAAATGTGATTCAACTATTAAAAAGCCAACAATCCAAAGATCCTCTATTACTTGGGATATGGGGGATGGGGGGGCTGGGTAAAACTACCATTGCCAAAGGTGTGTATAATCGAATTCGTCATGAATTCGAGGCTAAGAGCTTCCTCCTGAATGTCAGAGAAGTTTGTGAACAAAATAATGGCATAGTTTCTTTGCAACAAAAGCTTCTTTCTGATATCTACAAAACAACCAAGATAAAGATAGATACAGTTGAATCGGGAAAAGAAGAACTGAAGAGAAGGCTCAGCCAAAAGACAATATTTCTTGTGCTTGACGATGTGAATGATGAAGAACAATTGGATGCTTTGTGTGGAAGTCGTGATTGGTTTGGTTACGGAAGTAGAATAATCATCACAACAAGATATGAAAATATAGTTAAAAAGGAGTTTGGAGTTGAAGTTGTGTATAGAATAAAAGAAATGGACGACAAGGAGTCTCTTGAGCTTTTTAGTTGGCATGCATTTAAGCAACCAAGTCCTGAAGAAGATTTTGTTGATCTTTCTAGCGATGTAATTAAATACTGTGGGGGGTTGCCGCTGGCTCTTCAAGTAATTGGGTCCTTTTTGTTGACTAGGAGGAGGATAACAGTGTGGAAGAGTGTACTGGAGAAACTCAAAATGATTCCCAATAAAAAAGTTATGGAGAAGCTTAGAATAAGTTTTGATGGTTTAAGTGATGATGATGTTAAAGAAATATTCCTTGATATAGCTTTTTTCTTTATCGGGATGGAACAAGATGATGTGATTGAGATATTAAATGACTGTGGGCATTTTGCAGAAATTGGAATAAGTGTCCTTGTACAACAAAGCCTTATAACTATTGATAGGAAGAACAGGATTGGAATGCATGATTTGCTACGAGACATGGGAAGAGAAATCGTCCGCGAAAAATCAGCTGAAGAGGGCAAGGAGCCTAGTAGATTATGGCGTTACAAGGATGTAGATTTTGTATTATCCAAAGATACTAGAACAGTGGATGTTCGGGGACTGACTTTGAAGTCTCCAGAAAAGGATACAACTTATAAGTTGGAAGGCAAAGCATTTGAGAAGATGGATAAACTTAGATTGCTTCAACTTACTGGCGTGAAAATTGATGGAGATTATAAGTATCTTTCAAGAGATCTTAGATGGCTTTGCTGGCATAAATTTCCTTTAAAATATACACCACCAGACTTTCATCAGAATAGTCTAGTTGCCATTGACTTCAAATATTCCAATCTGGAACAAGTTTGGAAGAAGTCCCAGATGCTGAAGAAGCTCAAGTTTCTGAATCTTAGTCATTCTCCTAACTTGAGACAAACTCCAGACTTTTCAGACTTACCAAATCTTGAAAAGCTAGTACTGAAAGGTTGTACTAGTTTGTCTTTGATTTCTCATACTATTGGAAATCTCAATAAACTGCTTCTGATAAATTTGAAGAACTGTACCAGCCTTCATTCACTTCCAAGAAGCATCTATAAGTTGAAGTCGTTAAAAACTCTCATTTTGTCTGGATGTTCAAAAATTGACAAGTTGGAAGAGGATATAGAACAAATGGTATCTTTAACCACCCTGGTTGCAGATAACACTGCTATAACAAGAGTTCCCTTTGCTGTAGTAAGATCAAAAAGCATTGGATATATTTCTTTGTGCGGCTATGAAGGGTTCTCACGTGATGTATTTCCATCAATTATACAGTCTTGGATGTCTCCAACTAATAATATTTTATCCCAAGTTCAAACATCTGCTGCAGGGATGTCCCTTAACCTCTTGGATGAAGAAAAAAGTAGATCCTATGGTCTATTACATGCTCTTAAAGATCTTTCCAAGCTTCAACGCCTTTGGGTGAAGTGCGACTCAGAAGTTCAGCTGAATCAAAGTGTAGAAATAATTTTGGATACACTAAAAACCACAAATTTTGGGGAATTAGAAGGAACACCAAGCACATCTCATGTCTCAAACAATAGTTCTGCTTTAATTGATTGTCACAGCCAAGTTCGCATATCAGGGTCAAAAAATTCCTTGACTTCTCTTTTGATACAAATGGGAATGAACTGTCATGTCACCAATATTCTCAAAGAAATCATTTTACAGAAAATGAACCCCATCGGGTCGGGTTTACTTCCAAGTGACAACTATCCTGATTGGTTAGCATTCAATAGTGGATGTTCTTCTGTAACTTTTGAAGTCCCTCAAGTGGATGGGCGTAACTTGAAGGCAATCATGTGCATTGTCTATTCTTCTTCCTCAAACAACATCACATCAGAAGGCCTGAAAAGTTTGTTGGTGATAAATTGCACAAAGAACACCATTCAGCTCTATAAGAAAGATGCATTAGATTCCTTCGATGAAGAGGAGTGGCAGAAAGTAGTATCGAATATAGAACCTGGTAATGAAGTGAAGGTGGTTGTTGTTTTTGAAAATGGATTCACTGTGAAGAAGTCAGTTGTTTATCTCATATATGATGAACCAATTGACAAAAAGGCAGAGCACTACTGTGAGCCAGATAAGAATGTTGCTATTTCCGGTGGTGATGAAAATCTGTTATCTTGA 3465 0.3795 MFGRYRDVWESLLHNIKRSLIPEVRKILERTFDDLEDMEKIVFLDIACFCIGMDLNDVISMYTSPTEVAISVLQDKSLVTVDENYKLGMHVLLQQMGREIQKEESKKVVDQPKIYDVFLNFRGEDSRAKFILHLYASLQNAGINVFRDDDEIQRGDTISVSLLRAIRNSRISIVVFSKYYANSKWCMLELENIMETRRTMGLVVVPVFYEVDPSDVRHQRGDFGKAFEDLITKTSVDKFMVKNWRTALLEVGGMAGLVIINSRNESEDIMKVVEDVTDLLGRSDIIVADHPVGVDARVQNVIQLLKSQQSKDPLLLGIWGMGGLGKTTIAKGVYNRIRHEFEAKSFLLNVREVCEQNNGIVSLQQKLLSDIYKTTKIKIDTVESGKEELKRRLSQKTIFLVLDDVNDEEQLDALCGSRDWFGYGSRIIITTRYENIVKKEFGVEVVYRIKEMDDKESLELFSWHAFKQPSPEEDFVDLSSDVIKYCGGLPLALQVIGSFLLTRRRITVWKSVLEKLKMIPNKKVMEKLRISFDGLSDDDVKEIFLDIAFFFIGMEQDDVIEILNDCGHFAEIGISVLVQQSLITIDRKNRIGMHDLLRDMGREIVREKSAEEGKEPSRLWRYKDVDFVLSKDTRTVDVRGLTLKSPEKDTTYKLEGKAFEKMDKLRLLQLTGVKIDGDYKYLSRDLRWLCWHKFPLKYTPPDFHQNSLVAIDFKYSNLEQVWKKSQMLKKLKFLNLSHSPNLRQTPDFSDLPNLEKLVLKGCTSLSLISHTIGNLNKLLLINLKNCTSLHSLPRSIYKLKSLKTLILSGCSKIDKLEEDIEQMVSLTTLVADNTAITRVPFAVVRSKSIGYISLCGYEGFSRDVFPSIIQSWMSPTNNILSQVQTSAAGMSLNLLDEEKSRSYGLLHALKDLSKLQRLWVKCDSEVQLNQSVEIILDTLKTTNFGELEGTPSTSHVSNNSSALIDCHSQVRISGSKNSLTSLLIQMGMNCHVTNILKEIILQKMNPIGSGLLPSDNYPDWLAFNSGCSSVTFEVPQVDGRNLKAIMCIVYSSSSNNITSEGLKSLLVINCTKNTIQLYKKDALDSFDEEEWQKVVSNIEPGNEVKVVVVFENGFTVKKSVVYLIYDEPIDKKAEHYCEPDKNVAISGGDENLLS* 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3281 1154 SUPERFAMILY "Winged helix" DNA-binding domain 23 106 IPR036390 -
Lja3g3281 1154 Gene3D - 278 442 IPR027417 -
Lja3g3281 1154 SMART till_3 114 254 IPR000157 GO:0007165
Lja3g3281 1154 ProSiteProfiles TIR domain profile. 113 280 IPR000157 GO:0007165
Lja3g3281 1154 Gene3D - 113 277 IPR035897 -
Lja3g3281 1154 Gene3D - 451 536 IPR042197 -
Lja3g3281 1154 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 285 547 IPR027417 -
Lja3g3281 1154 SUPERFAMILY L domain-like 593 923 - -
Lja3g3281 1154 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 123 1124 IPR044974 GO:0006952
Lja3g3281 1154 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 102 IPR044974 GO:0006952
Lja3g3281 1154 Gene3D Ribonuclease Inhibitor 584 874 IPR032675 -
Lja3g3281 1154 PRINTS Disease resistance protein signature 315 330 - -
Lja3g3281 1154 PRINTS Disease resistance protein signature 486 500 - -
Lja3g3281 1154 PRINTS Disease resistance protein signature 392 406 - -
Lja3g3281 1154 PRINTS Disease resistance protein signature 797 813 - -
Lja3g3281 1154 SUPERFAMILY Toll/Interleukin receptor TIR domain 108 256 IPR035897 -
Lja3g3281 1154 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 123 1124 - -
Lja3g3281 1154 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 6 102 - -
Lja3g3281 1154 Pfam NB-ARC domain 296 520 IPR002182 GO:0043531
Lja3g3281 1154 Pfam TIR domain 115 276 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3281 Lja-Chr3 64130855 64139260 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3281 66 818 WRKY Transcription Factor Family AT4G12020 31.122 1.58e-83 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3281 - - lja:Lj0g3v0297389.2 1769.21