Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3280 ATGGTGGAGGAAGACAAGTTGAAAAGTTGGAGGCGAGCTCTTAGGAAAGCTAGCAAAATACCAGAATTTATCATGGCAGAATCAAGGACCGTAAACGTGGAAGTCAAGGTAGCAGTTAATTTAGTTAAGGCAGGTTTGAGAGACTACAAAGACTGGCTTGTTGCTGACTATCAAGTTGGGGTAGAATCTCGTGTGCAAGATGTGATTCGACTGCTGAACAGCCATCAATCACAACATCCTCTACTACTAGGGATATGGGGGATGGGAGGGATAGGTAAAACATCCATTGCCCAAGCCGTTTATAATCAAATTGGTTGTGATTTTAAGGCTAAGAGCTTCCTCCGAAATGTCAGGGAAGTTGGCAAACGGCATAATGGCTTAATTTCTTTACAGCAACTGCTTCTTTTTGAAATATTCAAAACAAGAAAAGCACAGATAGGTACAACTCAATCAGGAGAAAAGATACTGTGGGAAAGACTTCAAGATAGAAAAATACTTGTTATACTTGACGATGTGAATGAGTCGGAGCAGCTAAATGCTTTGTGTGGAAGTCGTGAATGGTTTGGTCCAGGTAGCATAATAATCATTACCACCAGAGATAGACGTCTCCTCGTGATGCTTGGAGTTGATCACGTGTATAGAGTGCCGGAACTAGACCAAAGGGAGTCTCTTTAG 675 0.4193 MVEEDKLKSWRRALRKASKIPEFIMAESRTVNVEVKVAVNLVKAGLRDYKDWLVADYQVGVESRVQDVIRLLNSHQSQHPLLLGIWGMGGIGKTSIAQAVYNQIGCDFKAKSFLRNVREVGKRHNGLISLQQLLLFEIFKTRKAQIGTTQSGEKILWERLQDRKILVILDDVNESEQLNALCGSREWFGPGSIIIITTRDRRLLVMLGVDHVYRVPELDQRESL* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3280 224 PRINTS Disease resistance protein signature 159 173 - -
Lja3g3280 224 PRINTS Disease resistance protein signature 82 97 - -
Lja3g3280 224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 223 IPR027417 -
Lja3g3280 224 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 37 205 - -
Lja3g3280 224 Pfam NB-ARC domain 62 205 IPR002182 GO:0043531
Lja3g3280 224 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 37 205 IPR044974 GO:0006952
Lja3g3280 224 Gene3D - 53 210 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3280 Lja-Chr3 64123164 64130734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3280 4 224 WRKY Transcription Factor Family AT4G12020 31.556 8.95e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3280 - - lja:Lj0g3v0188119.1 324.709