Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3274 ATGGCGGCTGAGGACTCAAATTTCGATGAATATTGGTGGGATTACTTCTTTCCCCCTCCTCCTTCTCCTCCTCCAGCTCCAGCTGTAAATGATGTGCTTTGGGACCAGTTCTTAACGGAAAGGCCAGCCGGAAGCAATTCGCCATCAGAGAGCTCAAATTCCGATGAATGGTGGGATTGTTCACCGTTCGATTTGGATCCTCCTTCTCCTTCTTCTTCTCCTCCTCTCCCTCCTCCACCTCCACCTCCACCTCCACCTCAAATGGGTTGGGAATATTTCTTTCCTCCTTTCCCAACGAGAATCCACGATGTGTTCTTGAGTTTCAGAGGGGAAGACACTCGTGCTTCCTTCACTTCACATCTCTATGCCGCTCTTCAAAACGCTGGAGTCAACGTTTTCCGGGACGACGATTCCCTTCCAAGGGGAGATCAAATTACAAATTCACTGATCGCAGCAATCGAACAGTCTGAAATTTCGGTTATCGTTTTCTCACCAAATTATGCGGATTCGCGGTGGTGTATGGAAGAGTTGGTGAAAATAATGGACTGTCACAGAACCATAGGCCAGGTGGTTCTGCCGGTGTTCTACCGCGTCGATCCCTCTGAAGTGCGGCGCCAAACCGGTGAGTTTGGGAAGAAATTTCACAATCTTGTAAACAAACTGCCAATGGATCCGGGGGGCCGTTGGAAGCGTTGGAGGGAAGCGCTTTGTGAGGCTGGTGGCATTGCAGGGTTTGTAGTCTTGAATTCCAGGAATGAAAGTGAGGCTATCGAGAAAGTTGTCGAAAATGTTACACAATTGCTTGACAAGACTGACTTGTTCATTGCTGATAATCCAGTCGGAGTTGAATCTCGAGTGCAAGATATAATTCAACTGCTAGACAACCAACCCTCAAATGATGTTCTACTACTCGGGGTATGGGGTATGGGAGGAATTGGCAAAACAACCATTGCAAAAGCTATTTACAATGCAATTGGCCGCAATTTTGAGAGTAGGAGCTTCCTTGCAAATGTTAGGGAAGTTTGGGAGCAAGATGCTGGACAAGTGCATTTGCAAGAACAACTTCTGTTTGATATCTTCAAGAAAACAACCAAGATACATAGCACTGAATCAGGAAAAAATATATTAAAGGATAGACTTTGCAGTAAAAGAGTACTTCTTGTACTTGACGATGTAAATAAATTGGACCAATTGAATGCTCTGTGTGGAAGTCGTGAATGGTTTGGTTCAGGGAGTAGAATAATCATCACAACCAGAGATCAACATATACTTAGAGGGAATAGAGTTGACCAAGTATACTTAATGGAAGAGATGGATGAAAGTGAATCTATTGAGCTTTTTAGTTGGCATGCATTCAAGAACGCAAGCCCTAGTGAAGATTTTGCTGAAATTTCTATAAATTTAGTTGAGTATTCTGGGGGATTGCCGCTAGCTTTAGAAGTCCTTGGGTCCTATTTGTTCGACAGGGGGGTAACAGAATGGAAGAGTGTCTTGGAGAAACTCAAAAGAATTCCCAATGATCTAGTACAGAAGAAGTTAAAAATAAGCTACGAAGGCTTAAATGATACAGAGAAAGAGATATTCCTTGACATAGCATGTTTCTTTATTGGGATGGAAAGGAATGACGTTATACATATATTAAATGGTTGTGAACTCTATGCAGAAATTGGAATAAGTGTCCTTGTTGAAAGAAGTCTTGTAACTGTTGATGATAAGAACAAGCTTGGAATGCATGACTTGCTGCGAGACATGGGGAGAGAAATCATTCGTGAGAAATCACCAAAGGAACCTGGGGATCGTAGCAGGTTATGGTTTGATGAGGACGTGCTTGGTGTATTATCGGAACAAACTGGAACAAACGCTATTGAAGGACTGGCTTTGAAGTTGCCATCTAATAATACAAAATGTTTCAGCACTAAATCGTTTGAGAAGATGAAGAGACTCAGATTGCTTCAATTTTCGGGTGTACAACTTCAAGGAGATTTTAAATATCTGTCAAGAAATTTAAGATGGTTGTGTTGGCACGGATTTCCTTTATCATTCATACCTAAACACTTATATCAAGGAAGTTTGGTTTCCATTGAGTTAGTAAACAGCGACGTCAAACTTGTGTGGAAAGAGGCCCAGATGATGGAGAAGCTGAAAATTCTGAATCTTAGTCATTCACAGCATTTGACACATACCCCAGACTTTTCAAATCTGCCTAATCTTGAGAAGCTTGTACTTAGAGATTGTCCAAGCCTGTCTGAGGTTTCCCCTAGCATTGGACATCTCAATAAAGTTGTTCTAATAAATTTGAAAGACTGCATTCGCCTTCGTAACCTTCCAAGAAGCATCTATAAGTTGAAATCTCTGAAAACCCTCATTCTTTCTGGATGTCTAATGATTGACAAGTTGGAAGAAGACGTCGAACAGATGGAATCTTTGACAACCCTGATTGCAGACAACACTGCAATAACAAGAGTTCCCTATTCATTAGTAAGGTCAAAAAGCATTGGTTATATATCTTTGTGCGGCCATGAAGGATTCTCACGTGATGTGTTTCCTTCTATAATTTGGTCTTGGATGTCGCCAGCAAATAATCTCCCATCTCTAGTTCAAACATCTGCAGGCATGTCATCTCTTGTTTCTTTAGATGTATCAAATAGTAGTTCCCATGGACTATCATCTATTCCCATGGACCTTCCAAAGCTTCCAAGTCTGTGGATGGAGTGCGGCTCAGAGCTTGAGCGATCTCGAGACGCTGAAATAGTTTTGGATGCCTTATATGCCACAAATTCTTCTAAAGAATTGGAATTAACTGGAACTACGTCAGAACTATCAAATGTGGACACTTCTGTGTTGACGGAATGCAACAGTCAAGTGCATGATTCTGGATCAAAAAGGGTCTTGAAATCTCTTCTAATTCAAATGGGAATGAATTGTCAAACCACCAGTATTCTGAAAGAGAGCATTTTACAGAATATGACAGTCAGAGGATCTGGTATTAGTTTGCTCCCTGGAGACAATTATCCAGATTGGTTGACCTTCAACTGTGAAGGTTCTTCTGTGATTTTTGAAGTCCCTCACGTGAATGGGCGTAGTTTGAAGACAATGATGTTTGTTGTCCATTCTTCTACCGCATATGACATAACGTCAGATGGCCTAAAAAATGTGTTGGTGATAAATTGTACAAAGAACACAATTCAGCTCTATAGGTGGAACACATTAGTCTCCTTTGAAGATGAAGAGTGGCAGAGAGTAGTATCAAATATTGAACCTGGTAACAAAGTGGAGGTGGTGGTTGTTTTTGAGAACGGATTCACTGTGAAGAAGACAGCAATTTATCTCATATATGATGAACCATTTGAAAAAGAGGCAGTTCACCACCATGAAAATGACACGAATGTTGGTGTTTCTGGGGATGATGAAAATAGATTTGATAAACTATTTTCTCTACTTCCTCCCATTGTTCGAGCCGTTCTGACTTCAAAACCTTTCTGGTTGATCGGTCTAGCTGTTATCTTGATTTGGTCTCGCTGCTTTTTTAATCAGCGACGAAGACGTAAACCCATTTTAAGAGGTGGGATGACGAAAATGAATCAATCTTTCTATGAAAGATTGGTTGATGCATATTGGCAGGGCATTTATTCCAAGTACTTCAAATTTATAAAAGTCGTTGGACGAGTTTACAAAACAAGTCGAGAATAA 3690 0.4106 MAAEDSNFDEYWWDYFFPPPPSPPPAPAVNDVLWDQFLTERPAGSNSPSESSNSDEWWDCSPFDLDPPSPSSSPPLPPPPPPPPPPQMGWEYFFPPFPTRIHDVFLSFRGEDTRASFTSHLYAALQNAGVNVFRDDDSLPRGDQITNSLIAAIEQSEISVIVFSPNYADSRWCMEELVKIMDCHRTIGQVVLPVFYRVDPSEVRRQTGEFGKKFHNLVNKLPMDPGGRWKRWREALCEAGGIAGFVVLNSRNESEAIEKVVENVTQLLDKTDLFIADNPVGVESRVQDIIQLLDNQPSNDVLLLGVWGMGGIGKTTIAKAIYNAIGRNFESRSFLANVREVWEQDAGQVHLQEQLLFDIFKKTTKIHSTESGKNILKDRLCSKRVLLVLDDVNKLDQLNALCGSREWFGSGSRIIITTRDQHILRGNRVDQVYLMEEMDESESIELFSWHAFKNASPSEDFAEISINLVEYSGGLPLALEVLGSYLFDRGVTEWKSVLEKLKRIPNDLVQKKLKISYEGLNDTEKEIFLDIACFFIGMERNDVIHILNGCELYAEIGISVLVERSLVTVDDKNKLGMHDLLRDMGREIIREKSPKEPGDRSRLWFDEDVLGVLSEQTGTNAIEGLALKLPSNNTKCFSTKSFEKMKRLRLLQFSGVQLQGDFKYLSRNLRWLCWHGFPLSFIPKHLYQGSLVSIELVNSDVKLVWKEAQMMEKLKILNLSHSQHLTHTPDFSNLPNLEKLVLRDCPSLSEVSPSIGHLNKVVLINLKDCIRLRNLPRSIYKLKSLKTLILSGCLMIDKLEEDVEQMESLTTLIADNTAITRVPYSLVRSKSIGYISLCGHEGFSRDVFPSIIWSWMSPANNLPSLVQTSAGMSSLVSLDVSNSSSHGLSSIPMDLPKLPSLWMECGSELERSRDAEIVLDALYATNSSKELELTGTTSELSNVDTSVLTECNSQVHDSGSKRVLKSLLIQMGMNCQTTSILKESILQNMTVRGSGISLLPGDNYPDWLTFNCEGSSVIFEVPHVNGRSLKTMMFVVHSSTAYDITSDGLKNVLVINCTKNTIQLYRWNTLVSFEDEEWQRVVSNIEPGNKVEVVVVFENGFTVKKTAIYLIYDEPFEKEAVHHHENDTNVGVSGDDENRFDKLFSLLPPIVRAVLTSKPFWLIGLAVILIWSRCFFNQRRRRKPILRGGMTKMNQSFYERLVDAYWQGIYSKYFKFIKVVGRVYKTSRE* 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3274 1229 Gene3D Ribonuclease Inhibitor 615 997 IPR032675 -
Lja3g3274 1229 SUPERFAMILY L domain-like 592 906 - -
Lja3g3274 1229 Gene3D - 265 432 IPR027417 -
Lja3g3274 1229 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 107 1111 IPR044974 GO:0006952
Lja3g3274 1229 ProSiteProfiles TIR domain profile. 100 268 IPR000157 GO:0007165
Lja3g3274 1229 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 107 1111 - -
Lja3g3274 1229 SMART AAA_5 300 439 IPR003593 -
Lja3g3274 1229 Pfam TIR domain 102 267 IPR000157 GO:0007165
Lja3g3274 1229 MobiDBLite consensus disorder prediction 26 89 - -
Lja3g3274 1229 Gene3D - 437 521 IPR042197 -
Lja3g3274 1229 SUPERFAMILY Toll/Interleukin receptor TIR domain 99 245 IPR035897 -
Lja3g3274 1229 SMART till_3 101 242 IPR000157 GO:0007165
Lja3g3274 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 268 531 IPR027417 -
Lja3g3274 1229 Gene3D - 100 264 IPR035897 -
Lja3g3274 1229 SUPERFAMILY "Winged helix" DNA-binding domain 509 613 IPR036390 -
Lja3g3274 1229 Pfam NB-ARC domain 283 518 IPR002182 GO:0043531
Lja3g3274 1229 MobiDBLite consensus disorder prediction 40 58 - -
Lja3g3274 1229 PRINTS Disease resistance protein signature 709 725 - -
Lja3g3274 1229 PRINTS Disease resistance protein signature 303 318 - -
Lja3g3274 1229 PRINTS Disease resistance protein signature 472 486 - -
Lja3g3274 1229 PRINTS Disease resistance protein signature 379 393 - -
Lja3g3274 1229 CDD AAA 280 420 - -
Lja3g3274 1229 MobiDBLite consensus disorder prediction 67 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3274 Lja-Chr3 63833805 63843775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3274 96 826 WRKY Transcription Factor Family AT4G12020 32.589 6.89e-92 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3274 - - lja:Lj0g3v0331109.1 1589.7