Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3266 ATGATAGTCGCAATGGACTTGAATGCCTCGCCGGTCCCTGAGGAAGATGAAGATACTTTTGAGGAGAGGATACATGTCGAGGAGTTTACTGCACCCGAAGAGCGCATTGAATCTGGAGCTGATATAGCACGCCGGGAGCGTGAAGAAAGAAAGAGACGGTTGAAGCGAGAACGTTCAGATGACAGACCCATGCAAGTATCTCAGTCAACCGGATATGATCCGCCATTTCATACTAAGATCCTTAAACAATATGATACAAGTAGACTTCCTCCGGGATGGTTGGATTGTCCTTCATTTGGCCAGGAAATTTGTTTCATGATACCTTCCAAGGTTCCACTTGGTGAAGCATACAATGATTGTGTTGCTCCTGGTAAAAGATACTCATTTAAACAAGTGATACACAACCAGAGAGTTTTAGGCAGAAAACTTGGTCTTGTGATTGATTTGACGAATACCTCCCGATACTATCCAGTCACAGATTTAAAGAAAGAGGGCATCAAGCATGTTAAGATTCAATGCAGGGGGAGGGATTCTGTACCTGATAATTTATCTGTGAACAAGTTCGTATATGAGGTTATTCAATTTATGTCGCGCCAAAAACACGCGAAGAAGTATATACTTGTTCATTGTACACATGGGCATAATCGTACAGGATACATGATCATCCATTATCTCATGCGTGCTACATCAATGTCTGTTACTCAGGCAATAAAAAATTTTTCTGATGCACGCCCTCCGGGAATCTATAAACCTGATTATATTGAGGCATTGTATACATTTTATCATGAAAAAAAGCCTGAAATGGTAGTTTGTCCTCCTACTCCGGAGTGGAAAAGATCTTCTGAATTTGATCTCAATGGTGAGGCAGTTCCAGATGATGATGATGATGGAATACCAGGCCCTGATTTGCAGGAGACACATGAGACAGACGCACGAATGACAAATGATGATGTTTTAGGAGATGAGATACCTGCTGATCAGCAAGATGCACTTCGACAGTTCTGTTATCAAACACTTAAATTGGGTGCTGGGGCCAGAGGACATACACAATTTCCAGGTTCACACCCAGTTTCTCTCAACAGGGATAATTTGCAGTTGTTACGACAACGCTATTATTATGCAACATGGAAGGCTGATGGTACACGATATATGATGCTAATAACATTGGATGGGTGTTTCTTGATAGATAGAAATTTTAATTTTCGAAGGGTCCAGATGAGATTTCCTTGCAGGAGTACAAATGATGGCTTGGGCGAGAAGACCCACCAATTCACATTACTTGATGGTGAGATGGTTATTGATACCTTGCCAGATTCACAGAAGCAGGAGAGAAGATACCTTATATATGATATGATGGCAATCAACCACGTATCAATAATAGAGCGACCCTTCTATGAACGGTGGAAGATGCTTGAGAAGGAAGTGATTGAACCTAGGAACCATGAACGACACAGTATATACCAGAGCAGAAATCCTTACTATAGATATGACTTGGAACCATTCAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTACTGTCACAAAGCTTTTAAAGGAATTCATAAAAAGACTCTCGCATGAGGCAGATGGTCTTATATTTCAGGGTTGGGACGATCCATATGTACCACGCACTCATGAAGGACTCTTAAAGTGGAAATATGCTAATTTGAATTCAGTTGATTTTCTATTTGAGGTTGATGGTGATCGTGAGCTACTTTTTCTCTATGAGCGTGGAAAGAAGAAACTCATGGACGGAAATAGGGTTACATTCGGAGATGACTCAGATCCCTCAGTTTATGCTGGAAAGATCATAGAGTGTTCCTGGGATTTTGATGAACTGGAATGGAAATTCTTGCGAGTCAGGACAGATAAATCAACTCCAAATGAGTTTAATACATACAAGAAGGTGATGCGAAGCATAAGAGACAACATTACGGAGGAGGACTTATTGAATGAAATAGATGAGATAATCCGGCTGCCTATGTATGCTGACAGGATAAGAATGGATAGTAAAGCAACTCAGCATGCAAATGCTGCAAGACGTAAGCAATGA 2055 0.4107 MIVAMDLNASPVPEEDEDTFEERIHVEEFTAPEERIESGADIARREREERKRRLKRERSDDRPMQVSQSTGYDPPFHTKILKQYDTSRLPPGWLDCPSFGQEICFMIPSKVPLGEAYNDCVAPGKRYSFKQVIHNQRVLGRKLGLVIDLTNTSRYYPVTDLKKEGIKHVKIQCRGRDSVPDNLSVNKFVYEVIQFMSRQKHAKKYILVHCTHGHNRTGYMIIHYLMRATSMSVTQAIKNFSDARPPGIYKPDYIEALYTFYHEKKPEMVVCPPTPEWKRSSEFDLNGEAVPDDDDDGIPGPDLQETHETDARMTNDDVLGDEIPADQQDALRQFCYQTLKLGAGARGHTQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITLDGCFLIDRNFNFRRVQMRFPCRSTNDGLGEKTHQFTLLDGEMVIDTLPDSQKQERRYLIYDMMAINHVSIIERPFYERWKMLEKEVIEPRNHERHSIYQSRNPYYRYDLEPFRVRRKDFWLLSTVTKLLKEFIKRLSHEADGLIFQGWDDPYVPRTHEGLLKWKYANLNSVDFLFEVDGDRELLFLYERGKKKLMDGNRVTFGDDSDPSVYAGKIIECSWDFDELEWKFLRVRTDKSTPNEFNTYKKVMRSIRDNITEEDLLNEIDEIIRLPMYADRIRMDSKATQHANAARRKQ* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3266 684 MobiDBLite consensus disorder prediction 1 72 - -
Lja3g3266 684 PIRSF mRNA_capping_HCE 76 684 IPR017074 GO:0004484|GO:0006370|GO:0140818
Lja3g3266 684 MobiDBLite consensus disorder prediction 23 63 - -
Lja3g3266 684 MobiDBLite consensus disorder prediction 288 311 - -
Lja3g3266 684 Coils Coil 40 60 - -
Lja3g3266 684 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 89 278 IPR029021 -
Lja3g3266 684 CDD RNA_5'-triphosphatase 92 258 - -
Lja3g3266 684 Gene3D Protein tyrosine phosphatase superfamily 85 297 IPR029021 -
Lja3g3266 684 Gene3D DNA ligase/mRNA capping enzyme 314 553 - -
Lja3g3266 684 CDD Adenylation_mRNA_capping 326 554 IPR001339 GO:0004484|GO:0005524|GO:0006370
Lja3g3266 684 ProSiteProfiles Dual specificity protein phosphatase domain profile. 116 267 IPR020422 GO:0006470|GO:0008138
Lja3g3266 684 SUPERFAMILY Nucleic acid-binding proteins 556 668 IPR012340 -
Lja3g3266 684 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 316 554 - -
Lja3g3266 684 ProSitePatterns Tyrosine specific protein phosphatases active site. 208 218 IPR016130 GO:0016311|GO:0016791
Lja3g3266 684 ProSiteProfiles ATP-dependent DNA ligase family profile. 437 581 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Lja3g3266 684 PANTHER MRNA-CAPPING ENZYME 3 683 - -
Lja3g3266 684 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 3 683 - -
Lja3g3266 684 Pfam mRNA capping enzyme, C-terminal domain 590 651 IPR013846 -
Lja3g3266 684 Gene3D - 593 660 IPR012340 -
Lja3g3266 684 SMART dsp_5 103 263 IPR020422 GO:0006470|GO:0008138
Lja3g3266 684 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 186 255 IPR000387 GO:0016311|GO:0016791
Lja3g3266 684 Pfam Dual specificity phosphatase, catalytic domain 142 261 IPR000340 GO:0008138|GO:0016311
Lja3g3266 684 Pfam mRNA capping enzyme, catalytic domain 355 553 IPR001339 GO:0004484|GO:0005524|GO:0006370
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3266 Lja-Chr3 63696390 63711965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3266 1 675 Protein tyrosine phosphatase (PTP) family AT3G09100 69.310 0.0 946
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3266 K13917 - gmx:100776633 1250.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3266 3 63696390 63711965 Lja3g3266 3 63696390 63711965 ECH