Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3231 ATGGCAGGTAAGTCTCACAATTTCACCTATGATGTTTTCATCAGTCTTAGAGGTGAAGTTTTACGAGACACCTTTATAGAATGTTTTCTTAAAGAGCTGATGCAGAAGGGGATCAAAACATTCATTGATGATGAGATAATGGAGGCAGGGGATGTTATTTCACCTGCTGTTTCCAAAGCCATTGAAGAATCCAAGGTTTTAATTGTTGTGTTTTGTGTGAATTACGCGTCTTCCACGCGTTGTCTTGATGAACTTTACAAGATTTACTCAAGGAGGATTGGCTATGAACAACATGTTTTTCCAATTTTTTACCTCATTGAGCCGACCGTCGTACGACATCAGACTGCGAACTACGCTGAAGCAATGACTGCCCACGAGGAGAGATTTGGCCAAAGCTCCGAGAAAGTCGAAACATGGAGACTAGCTTTGAATGGTATATGTCAAATATCTGGGCACCATGCTTCCAATAGGTCTGAAACAATTTTTGTTGAAAAGATTGTTAATCAGATTTATGTTAAGATAGCTTCTAAACGCCTTCATGTTAAGCACACATTTGGACTTGAGCAACGCATGAAAGAGGTGCAGTCACTCATAGACGTGAAGGCTGATGATGATAATGTATGCATGCTGGGAATATACGGACTTGGTGGTATAGGGAAAACTGAACTTGCTAAAGCTTTGTATAACAATTTTGTGGACAAATTTGAATTCTCAAGTTTTATTACCAATGTTAAAGAGAAATCAAAAAAAGCCAATGGCCCAGAAGATCTACAGAAGACTCTATTATTAAAGATGTCTGAAGTGCTAGAAACTGAGTTGGGCAGTACAAGTGCAGGAAGTCGTGAAATAAAACGCAGGCTTCACAAGAAAAAAATTCTTCTGGTTATTGATGATGTTGATGATATAGAACAATTGAATAACTTGGTAGGTGGATGTGATTGGTTTGGTTCGGGTAGCATAATCATCATAACAACTAGGGATGAAAATTTGCTACGTCATCATCAAGTTAAAAAGTCTTACAAGATGGTGGAACTTAATGATGAACAATCTCTTCAGCTCTTCAGTCATCATGCATTTGGGAATAAGGATCCTAAAATTGGTTATGAAGATATATCTTCCCGTGCAATATGTTATGCAAAAGGTCTTCCATTGGCTTTAGAAGTCATAGGCTCCGATTTGCGCACTGAATCAAGTCAAGAAGATTGGGAGCGTGTATTAAATATATACAAGATGAATCTGAATCCTCGGATTCAAGACGTTCTCAAAATAAGCTATGAAAGATTGGAGCCCAATGCCAAGCAAGTTTTCTTGGATATAGCTTGCTTCTTCAAAGGGGAGAGAATAGAATATGTTAAAAGGATACTAAAGGAACTATATGCACTGCGAAATATTCATATACTTGGTAGAAAATCTCTCCTAACTTTTGAAGATGGTTGTTTGAATATGCATGACCTAATTCAAGATATGGGTAGAGAGATTGTTCGGGATGAGGCACCAGAAAATCCTGGAAAACGAAGTAGGTTATGGTCGCATGAAGATGTTACTAAAGTATTGACTGGAGATTTGGGAAGTGATAAAATTGAAGGGGTAATGCTTGATCCTCCCCAACGAATAAAAGTAGGGTGTAATGGTACCGCCTTTGGAAAGATGAAATGCCTCAGAATTCTCATTGTTCGAAATACGTCCTTTTCAACAGAGCCCAAAGATCTTCCAAATCATTTAAGGGTGCTTGATTGGGAGGAGTTCCCTTCAAAGTCCTTCCCGCCAAAATTCAATCCGGAGAAAATCATTGTCTTCAATTTGCGTAGAAGTTGTCTTACACTGGAAAAGCCATTTCAGAAATTTCCAAGTCTGGCCACCATGAACTTCTCACATAATGAATGTATCACTGCAATGCCTAGTGTGTCTGAAGTTCCAAATTTGATAGAAATAAGACTTGACTATTGCAAGAACCTAATCAAGGTTGATGAATCTGTGGTATTGCTCCAAAAACTTGCTCACTTAAGTGCTGCTGGATGCGGTAAGCTTACAGATTTCCCGCGAAGCATGCATTTACCATCTCTGGAAGTCCTTGACCTTAATTCATGCACAAGACTAAAACATTTTCCAGAGATAGTGTACAAGATGAACCAGTTAGTGAAGATAGATATAAAAAATACTGTTGTTGAAGAGCTGCCAGATTCTATCAGTAACCTTACTGGTCTTGCTTCTATAGAGATGATAGGTTGCAGGAAACTCAGATATATTCCACATAGCTTATTCATGTTAAAGAATGTTGTCACTTTTAAACTGGGAGGATGTTCTAACATTCGAGAATCCTTCAGAAACTTTGCACGTAGCCCTGCAGCTGCCAATGGTCCTTCAACTTTAAAATCATTGTATTTTGAAAGTGGTGGTTTATCGGATGAAGATTTTGATGCAATTCTCAAATGTTTTCCAAACTTAGAAGAGTTGATTGCATTGGATAACAACTTTGTATCCCTCCCTGAATGCATTAAAGAGTGTGTTCACTTGACAAGTCTTGATGTGAGTGAGTGCAAGGAGCTTCAGAAAATTCCTGAATGCACAAGCTTGAGAATTCTTAATGTCCATCTTTGCAAGAAGCTTGAAGAAATTTCAGAGTTGCCATCTACTATTCAAAAAGTGGATGCAAGAGACTGCTGCTCTTTAACTAGAGAGACATTAGACATGTTATGGTTTCTGGTGAAAAAAGAGATACCGGGATTAGAAGTTGTGATGCACCCAACTGAGATTCCAGACTGGTTTGACTGGAGGGACAAACGAGGAAATCCACGTTTCTGGACTCGTGGGAAGTTCCCTGTTGTTGCTTTAGCGCTGTTGTTTAGTAAAGAGAAAGGAGCATCTAGAAATTCTCGGCATCAACTTGTTGAGCTCCAACTGGTCATCAATGGAAAACGTGTGCCTCGCAAAGGCTGCTACAGCTTCAGAATGGAAGCAGAACATGTACTAGTCTGCGATCTACGACTCTTGTTCAGCGAAGAGGAGTGGCAGGGCCTTGATGAATTTCTAGTGCATGATTGGAATCAAGTGCAGGTTTCATATGAAGCCCCATCAACCATGACATTAAGTAATTGGGGTGTTTTCGAGTACAAAAATGAAACCAACATGGAAGATGTGCAGTTCGTGTGTCCTGACCCAAGGTATATCTCAGATATGATAGCCAACAACATATCATCACCCACAATAGTACCTACTGGTGGAGATCCTATGTTGGAGATAAGGAAGAAGATACAAGAGATGGGCCTAGAAGACACATATGTAAATACTTTGCTCCAAATGGGAGGCTTCGAAAATAATAACTTTGAAGATAAAGAATTTGCTATGGAGCAAATGAATGTTCTATTGCAAAATCTGGAGCAGATGTCGAGGGAGGCTAAGGATGTATCACAAGGCAAAGCACTAGATGATAAATCCCTACTGAAACAGTTTTTAGACGCTCAGGAAGATAAGAGTGGTAGGATAATTCACTTTGGCGATCTCGCGTTGGTACCTGTAAATACTGGATTTAATCGACCTATAGATGTAGAAGAAGCTTTACGTTCAAACTCTAGTCATGTGATAAATTTACAGAGAAGAGATCCTATGATGGCGATATTCCATGAGGGGATAGTGGATGGACTCTCTGAAGCACAGAAAAGCTTTCCTGCTCTTGATATACTGAAAACTCTAATTGCAACCTTAAATAAGGGTAATAGGGTTGCATGGTCACTCCCAGATGGTCTAGTGCCGCCTCAACAGATGACATACATAGTAGGTGTTGTCAATGGACTCCGGGAAGCAAAGCTGAGCTTTCCCACTTTGGACGTAGATGCAATACTGAATTTTGTGTTAAGTAAAGTGGGGTTTGCAGAATTAAAGTTCACTGTGAATGGAGGAGGTGGAGTAGGAGGAGAAGCTTCAACAAGCTCTAGCCATCAAAGCTTTCCCCCACTGGATGTAGAGACAACATTGAGTAATGTGTTGTTGGGAATGAGGGCCCATGAAGAAATGAAGTCCCCTATGAAGGTAGGAGAAGCTTCAACATCTGCTCAGTACCAAGGGAATAATTCAGATCAGGTACTACAAATACAGAGGAACAATCCTCAGGAGGAGGAAGAAAGAAGGATGGAGGTCATATTGTTGAAGGGAATGAGGGATGGACTTGTTGAAGCTCAGAACATGTTTCCTACTATAGATATTGACACAATTATGGCTGCAACTCTTGAAAAGGGAATGAGGTTCCAATTGCCACCAGTGCCTGCAGAGTGTGGGAAACTACTATCCACACCCGAAATGAAGAGATACGTAGAAGGAATTATCAATGCACTCCAGGAAGCTAAGCTGAGCTTTCCCACTTTGGAACTAATGGCAATATTGGACCCTTTGTTAAATAAGGCAGCAACAATGGCGATATTCTCAAGTGGAATGAGGAAAGGACTTGTTGAAGCAAAGAAAAGTTTTCCTACTTTAGATATAGAAGCAACCATGAATATTGCAGCCTGTAATATTACTAGGTTTGAAGGGACACCAGTCCCAGAGTCTGAGGTAGAAAAACTTGAACTAGAAAAGATGGTATACAAATATGGCATTATCAACGGACTTGAGGAAGCAAAGCTGAGCTTTCCCTCACTGGATGTAGAGGCAATAGTGAGTAATGTGTTGGGTATGAGGGGGGGACATGAAGAGATGAAGTCCCCTATGGAGGTAGGAGAATCTTCAACGTCTGCTCAGCACCAAGGGAATAATTCAAAATCTACTTTGAGTGGCTTGGATTTGCAGAAAGACAGTGGAAAAGAAGGTTGCAAGAAGCATAAGAAGCTAGCTGCTGTTTTGACAGAAAGAGGAGAAGAATTGCTGGGGCTCTATGATGCTGAGATTGAAGCCTTCCAGAAATCACAAGAGTCTGATCATGATCTGATGAGTGCAGTATATTTCCAAGGAGTGAGGGATGGAGTCCTCGAAGCACATGCCCTATTGCTTGCTCTGGATGACATGGACAAAGTAACTGATCCACAACATGTTACTCCTGATGATGAGGCTCCCTCAAGATCTGCTAATTCGAGTGGAAAAGAAGGGTGCAAGGGTGTTACAAAGCTAGCTGCTGTTTTGAAAGGAAGAGGTGAAGAATTGCAGGGGCTTTATGATGCTGGGATTGAAGCCTTCCAGAATTCACAAGAGTCTCATGATCTGATGAATGCAGTATACTTGAGTGGACAGAGAGATGGAGTCTTTGAAGCACATACCATCTTGCTCGCTCTGGACATGGACAGAACATTGTAA 5280 0.4061 MAGKSHNFTYDVFISLRGEVLRDTFIECFLKELMQKGIKTFIDDEIMEAGDVISPAVSKAIEESKVLIVVFCVNYASSTRCLDELYKIYSRRIGYEQHVFPIFYLIEPTVVRHQTANYAEAMTAHEERFGQSSEKVETWRLALNGICQISGHHASNRSETIFVEKIVNQIYVKIASKRLHVKHTFGLEQRMKEVQSLIDVKADDDNVCMLGIYGLGGIGKTELAKALYNNFVDKFEFSSFITNVKEKSKKANGPEDLQKTLLLKMSEVLETELGSTSAGSREIKRRLHKKKILLVIDDVDDIEQLNNLVGGCDWFGSGSIIIITTRDENLLRHHQVKKSYKMVELNDEQSLQLFSHHAFGNKDPKIGYEDISSRAICYAKGLPLALEVIGSDLRTESSQEDWERVLNIYKMNLNPRIQDVLKISYERLEPNAKQVFLDIACFFKGERIEYVKRILKELYALRNIHILGRKSLLTFEDGCLNMHDLIQDMGREIVRDEAPENPGKRSRLWSHEDVTKVLTGDLGSDKIEGVMLDPPQRIKVGCNGTAFGKMKCLRILIVRNTSFSTEPKDLPNHLRVLDWEEFPSKSFPPKFNPEKIIVFNLRRSCLTLEKPFQKFPSLATMNFSHNECITAMPSVSEVPNLIEIRLDYCKNLIKVDESVVLLQKLAHLSAAGCGKLTDFPRSMHLPSLEVLDLNSCTRLKHFPEIVYKMNQLVKIDIKNTVVEELPDSISNLTGLASIEMIGCRKLRYIPHSLFMLKNVVTFKLGGCSNIRESFRNFARSPAAANGPSTLKSLYFESGGLSDEDFDAILKCFPNLEELIALDNNFVSLPECIKECVHLTSLDVSECKELQKIPECTSLRILNVHLCKKLEEISELPSTIQKVDARDCCSLTRETLDMLWFLVKKEIPGLEVVMHPTEIPDWFDWRDKRGNPRFWTRGKFPVVALALLFSKEKGASRNSRHQLVELQLVINGKRVPRKGCYSFRMEAEHVLVCDLRLLFSEEEWQGLDEFLVHDWNQVQVSYEAPSTMTLSNWGVFEYKNETNMEDVQFVCPDPRYISDMIANNISSPTIVPTGGDPMLEIRKKIQEMGLEDTYVNTLLQMGGFENNNFEDKEFAMEQMNVLLQNLEQMSREAKDVSQGKALDDKSLLKQFLDAQEDKSGRIIHFGDLALVPVNTGFNRPIDVEEALRSNSSHVINLQRRDPMMAIFHEGIVDGLSEAQKSFPALDILKTLIATLNKGNRVAWSLPDGLVPPQQMTYIVGVVNGLREAKLSFPTLDVDAILNFVLSKVGFAELKFTVNGGGGVGGEASTSSSHQSFPPLDVETTLSNVLLGMRAHEEMKSPMKVGEASTSAQYQGNNSDQVLQIQRNNPQEEEERRMEVILLKGMRDGLVEAQNMFPTIDIDTIMAATLEKGMRFQLPPVPAECGKLLSTPEMKRYVEGIINALQEAKLSFPTLELMAILDPLLNKAATMAIFSSGMRKGLVEAKKSFPTLDIEATMNIAACNITRFEGTPVPESEVEKLELEKMVYKYGIINGLEEAKLSFPSLDVEAIVSNVLGMRGGHEEMKSPMEVGESSTSAQHQGNNSKSTLSGLDLQKDSGKEGCKKHKKLAAVLTERGEELLGLYDAEIEAFQKSQESDHDLMSAVYFQGVRDGVLEAHALLLALDDMDKVTDPQHVTPDDEAPSRSANSSGKEGCKGVTKLAAVLKGRGEELQGLYDAGIEAFQNSQESHDLMNAVYLSGQRDGVFEAHTILLALDMDRTL* 1760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3231 1759 MobiDBLite consensus disorder prediction 1563 1598 - -
Lja3g3231 1759 PRINTS Disease resistance protein signature 286 300 - -
Lja3g3231 1759 PRINTS Disease resistance protein signature 683 699 - -
Lja3g3231 1759 PRINTS Disease resistance protein signature 379 393 - -
Lja3g3231 1759 PRINTS Disease resistance protein signature 209 224 - -
Lja3g3231 1759 ProSiteProfiles TIR domain profile. 8 174 IPR000157 GO:0007165
Lja3g3231 1759 Gene3D - 174 342 IPR027417 -
Lja3g3231 1759 Gene3D Ribonuclease Inhibitor 521 697 IPR032675 -
Lja3g3231 1759 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 151 IPR035897 -
Lja3g3231 1759 Pfam TIR domain 10 175 IPR000157 GO:0007165
Lja3g3231 1759 SMART till_3 9 149 IPR000157 GO:0007165
Lja3g3231 1759 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 1104 IPR044974 GO:0006952
Lja3g3231 1759 Gene3D Ribonuclease Inhibitor 698 899 IPR032675 -
Lja3g3231 1759 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 1104 - -
Lja3g3231 1759 MobiDBLite consensus disorder prediction 1568 1592 - -
Lja3g3231 1759 SUPERFAMILY L domain-like 482 898 - -
Lja3g3231 1759 Gene3D - 344 429 IPR042197 -
Lja3g3231 1759 Coils Coil 1111 1135 - -
Lja3g3231 1759 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 439 IPR027417 -
Lja3g3231 1759 MobiDBLite consensus disorder prediction 1670 1692 - -
Lja3g3231 1759 Pfam NB-ARC domain 191 410 IPR002182 GO:0043531
Lja3g3231 1759 Gene3D - 3 173 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3231 Lja-Chr3 62944414 62958484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3231 10 779 WRKY Transcription Factor Family AT4G12020 29.161 2.53e-79 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3231 - - lja:Lj0g3v0306049.1 3113.17