Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3227 ATGGCGGCAGAGCATGGAGAAGTGAGGCTGTTGGGGAAATGGGCAAGCCCATTCAGCAACAGAGTCGACCTTGCTCTGAAACTCAAAGGAGTTCCTTACAATTACTCAGAGGAAGATCTAGCTAACAAGAGTGCTGATCTTCTCAAATACAACCCTGTTTACAAGAAGGTCCCAGTTCTTGTTCACAATGGAAACCCACTTGCAGAGTCTCTTGTCATTCTTGAATACATAGATGAGACATGGAAAAACAGCCCCTTTTTGCCTCAAGATCCTTATGAGAGAGCAGTTGCTCGTTTCTGGTCTAAGACCCTCGATGACAAGATTTTGCCTCCTATATGGAATGCTTGCTGGAGCGATGAGAAGGGGCGCGAGAAAGCTGTGGAAGAAGCCCTGGAAGCTCTGAAGTTACTGCAGGATCAGCTGAAGGACAATAGGTTCTTTGGAGGAGAGACCATAGGATTGGTAGATATTGCTGCCAATTTCATTGGATATTGGGTTTCTATATTACAAGAAATTGCAGGGTTAGAGTTGCTTACTGTTGAGAAATTTCCCAAGCTGTTTAAATGGAGCCAAGAATTTGTCAACCACCCTGTGATCAAGGAAGGCCTTCCTCCCAGAGATGAATTGTTTGCTTTTTTCAAAGCATCACAAAAGAAGTAG 660 0.4424 MAAEHGEVRLLGKWASPFSNRVDLALKLKGVPYNYSEEDLANKSADLLKYNPVYKKVPVLVHNGNPLAESLVILEYIDETWKNSPFLPQDPYERAVARFWSKTLDDKILPPIWNACWSDEKGREKAVEEALEALKLLQDQLKDNRFFGGETIGLVDIAANFIGYWVSILQEIAGLELLTVEKFPKLFKWSQEFVNHPVIKEGLPPRDELFAFFKASQKK* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3227 219 CDD GST_N_Tau 8 81 - -
Lja3g3227 219 Pfam Glutathione S-transferase, C-terminal domain 118 197 IPR004046 -
Lja3g3227 219 CDD GST_C_Tau 91 215 IPR045074 GO:0004364|GO:0006749
Lja3g3227 219 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Lja3g3227 219 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Lja3g3227 219 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 216 - -
Lja3g3227 219 SFLD Main (cytGST) 5 218 - -
Lja3g3227 219 SUPERFAMILY GST C-terminal domain-like 79 217 IPR036282 -
Lja3g3227 219 Gene3D Glutaredoxin 1 86 - -
Lja3g3227 219 Gene3D - 87 219 - -
Lja3g3227 219 Coils Coil 124 144 - -
Lja3g3227 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Lja3g3227 219 SFLD Main.3: Omega- and Tau-like 5 218 IPR045073 -
Lja3g3227 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 216 IPR045073 -
Lja3g3227 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 219 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3227 Lja-Chr3 62819473 62821551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3227 8 215 Glutathione S-transferase Gene Family AT3G09270 59.524 3.01e-90 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3227 K00799 - gmx:100527381 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3227 3 62819473 62821551 Lja3g3227 3 62819473 62821551 ECH