Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3218 ATGGAAAAACATTTGCGCTGGGTGGATCAGACGAAATCACTTGTGAAGTTCCCAATTGTTGGTGGTGGAGCCATGACCATCGCCACAGAATATGGTGCGGGTTTGAGGACGAGGAATAAGCGGAAGAGAAGGGGACCAAAACTAATAAAAATAATTGAAGAGACCAAAAGCGATAAAAAAGGTCATGTGGAAGTTCATGTGAACAAGATTAATGAACCCTCCAAGAGATACATGCAATACTACCAACATATGGAAGCTATTGTAACATCATTTGAGTATGTTTCAGGTCTCAGTAATACAGCTCCCTATGCAAGTTTGGCTATAAAAGCCATGTCCAAACATTTTAGGTCCTTGAAGAATGCAATAATTGACCAACTTCAGTTCACCAATAAAGCCCATTCTCACATAAGCAACAAGAAGGATGAACCTCCAAGATCAGGGTTTCTTGAGCACCAACCTGTTTGGCAACCGCAAAGAGGACTCCCCGAACGTGCTGTGACTATTCTTAGATCATGGTTGTATCAACAGTTTCTACACCCTTATCCTACTGATACTGACAAGATGATGTTGGCTAAAAAAAATAGTCTCTCTCGTAGTCAGGGGATGGGTTTTGCTGAACCCTATCCTTTGAGTGCAGCTCAACGTTTTGGTCTTGCACATGAAACCAATAATGAAGGTTATGTTATGAGTGGTTTAGAATCACAAAGTATGCATTTTGGAAGAGATATTATTGGGGGAAAATGTTGTATGACTCTGTAG 759 0.4084 MEKHLRWVDQTKSLVKFPIVGGGAMTIATEYGAGLRTRNKRKRRGPKLIKIIEETKSDKKGHVEVHVNKINEPSKRYMQYYQHMEAIVTSFEYVSGLSNTAPYASLAIKAMSKHFRSLKNAIIDQLQFTNKAHSHISNKKDEPPRSGFLEHQPVWQPQRGLPERAVTILRSWLYQQFLHPYPTDTDKMMLAKKNSLSRSQGMGFAEPYPLSAAQRFGLAHETNNEGYVMSGLESQSMHFGRDIIGGKCCMTL* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3218 252 Pfam Associated with HOX 46 122 IPR006563 -
Lja3g3218 252 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 70 200 - -
Lja3g3218 252 Gene3D - 161 201 - -
Lja3g3218 252 Pfam Homeobox KN domain 172 200 IPR008422 GO:0003677|GO:0006355
Lja3g3218 252 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 70 200 - -
Lja3g3218 252 SUPERFAMILY Homeodomain-like 158 200 IPR009057 -
Lja3g3218 252 SMART prehox3 21 124 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3218 Lja-Chr3 62364127 62366885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3218 67 200 Homeobox Transcription Factor Family AT5G02030 49.375 8.63e-45 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3218 - - gmx:100805512 213.772