Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3213 ATGGCTCAGGCGACGGGGCGGAGCAGGGTGGTCGGAGACTACGTGGTGGGGAAGCAAATCGGCGCGGGGTCGTTCTCGGTGGTGTGGCATGCGAGGCACAAGGTTCATGGCACCGAGGTGGCTATCAAGGAGATTGCCACGCTTAAACTCAACAAGAAGTTGCAGGAGAGTCTCATGTCTGAGATTTTCATCTTGAAGCGGATTTCCCATCCTAACATCATCTCGTTGCACGATATCATTCAGGCTCCTGGAAAGATACATCTCGTGTTAGAGTACTGTAGAGGGGGAGATCTCTCTTTGTTCATTCAACGCCATGGAAGGGTAACTGAAGCAACTTCAAAGCATTTTATGCGGCAGCTGGCTGCTGGCCTGAAAGTTCTTAGGGACAATAACCTTATCCACAGAGACCTGAAACCGCAGAATCTTCTTCTCTCCAGAAATGATGAGAAGTCTGTGCTGAAGATTGCTGACTTTGGATTTGCAAGATCTCTGCAACCAAGGGGACTTGCAGAAACCTTATGTGGTTCACCACTCTATATGGCTCCAGAAATCATGCAACTACAGAAGTATGATGCTAAGGCAGATCTGTGGAGTGTCGGTGCAATCTTATTTCAACTTGTTACAGGAAGAACACCTTTTACGGGAAACAATCAAATGCAGTTGCTACAGAATATTATGAAAGCTACAGAATTGCAGTTCCCACCTGATAACCAAAGTCTGAGTTCTGATTGCAAAGATTTGTGTCAGAAATTGCTACGCCGTAATCCAGTGGAGCGTCTAACTTTTGAAGAATTCTTTAACCACCCATTCCTTTCGCAGAAGCAAACAGAACAAGATGAAACCTTGAGTAATAGAAGTTCAAGGCTGGTAGGTGAGTTTTGTTCAACAGTGTCTGACCCTTCGAGAAGAACTGAGGAAAATCATCAAGAGGATTGCTTACCTTTCATTCTAGATGACGATTCTAGTGGACCTGATGGAAGTCCATCGTTTTCAAGAAAGAAGTCTTCGATGAAGTCTACCTTTGGATTCGATCTAAATACAAAGTTAGATAAAGCAGAGTCAGGGTCTCCGAATTCTTATAACATCAATCGTTCCAGATATACTAGTGTGACACAGAGAGCTGAAACCACTACTAAAAGATTGGAGAACCACAAAATTTCAGGGAGAAATCTGAATGATCCTTTAGAATCTCCAGAACAGTTATTTGCTAACCCTTATCCAAAAGCTGCGGATTCACTAGAGAATATTGATCAGGATTATGTTCTTGTGTCTGGGCCACCTATGGATATTTCATCTTCTTCAGTGAATGCTTCAAAGCCTAGTCATTCCCTATATAGGTCAGGTAGTTTCCCCAATGAGTCTTCTAATAGAATCACTAGATTAAGTGCTCCAATGCCAATCGTTGGTGTACCTACCAATAGCATATGCCAAATTGGAAGTTCAGGTAGTCAGGATTCTGCTCCTGGGACTTCACATGGATCAATGGATATGGGTGATGAACAGCCATCAACTGACTGCATGACGAGGGTAAAGTCATTGCAACAGTGTGCTGCTGCCATCACGGAGTTAGTTAATGAAAAGATCACAGCAGGAAAGCAGCTAGAAGCGTTTTCTATTCAGCTTGTTATTCTTGCTATTTGGAAACAAGCACTTCACATATGCCATACACAGGCTGCCTCGGCCATGGAAGGAAGTCCAAACCAAGAAGCTTCAAGATACAGGAGGAGTACCAGCAAGAAGCATGGTAGTTCTGATTCAGAAGAGTGCCTTGATGGAAACACCCAAGGGCCAAAGGATATATTATCTAAAATTGAAAGTGAATTTCTGAGGGAATTTGAGCATGCTGAAGATCTTGCCAAGCCAATAGAGCCTGGGAATACAGAGATGCCAGATGCAATGGAGACAATATTTCAAACTGCTCTTGCTTTTGGGAGGCATGGCGGTGTAGAAGAACTCATGGGCGAAATGGAAAGTGCAGCTGCATTGTATTCAAAAGCTGTGCGTCTGTTAGTTTTCCTTCTAGTGGAAGGACCATCCCTGATTCTTAACCCTCCATTTTCACTGACAAACACAGACCGTTACAGGCTTCGGAATTACATTGACATTCTTAATAACAGGCAAGATTATTCAAGGTCTCAGCGAATCGCTCTTCTGAAAGCAGATGATAGTCAAGGTATCCTCAAGGAAAAGTTTTAG 2196 0.4353 MAQATGRSRVVGDYVVGKQIGAGSFSVVWHARHKVHGTEVAIKEIATLKLNKKLQESLMSEIFILKRISHPNIISLHDIIQAPGKIHLVLEYCRGGDLSLFIQRHGRVTEATSKHFMRQLAAGLKVLRDNNLIHRDLKPQNLLLSRNDEKSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNNQMQLLQNIMKATELQFPPDNQSLSSDCKDLCQKLLRRNPVERLTFEEFFNHPFLSQKQTEQDETLSNRSSRLVGEFCSTVSDPSRRTEENHQEDCLPFILDDDSSGPDGSPSFSRKKSSMKSTFGFDLNTKLDKAESGSPNSYNINRSRYTSVTQRAETTTKRLENHKISGRNLNDPLESPEQLFANPYPKAADSLENIDQDYVLVSGPPMDISSSSVNASKPSHSLYRSGSFPNESSNRITRLSAPMPIVGVPTNSICQIGSSGSQDSAPGTSHGSMDMGDEQPSTDCMTRVKSLQQCAAAITELVNEKITAGKQLEAFSIQLVILAIWKQALHICHTQAASAMEGSPNQEASRYRRSTSKKHGSSDSEECLDGNTQGPKDILSKIESEFLREFEHAEDLAKPIEPGNTEMPDAMETIFQTALAFGRHGGVEELMGEMESAAALYSKAVRLLVFLLVEGPSLILNPPFSLTNTDRYRLRNYIDILNNRQDYSRSQRIALLKADDSQGILKEKF* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3213 731 MobiDBLite consensus disorder prediction 559 597 - -
Lja3g3213 731 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Lja3g3213 731 CDD STKc_ATG1_ULK_like 20 270 - -
Lja3g3213 731 SUPERFAMILY Protein kinase-like (PK-like) 10 467 IPR011009 -
Lja3g3213 731 MobiDBLite consensus disorder prediction 573 587 - -
Lja3g3213 731 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1B 1 705 - -
Lja3g3213 731 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 1 705 IPR045269 GO:0004674|GO:0006914
Lja3g3213 731 MobiDBLite consensus disorder prediction 314 336 - -
Lja3g3213 731 Pfam Protein kinase domain 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g3213 731 ProSiteProfiles Protein kinase domain profile. 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g3213 731 MobiDBLite consensus disorder prediction 479 505 - -
Lja3g3213 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Lja3g3213 731 Gene3D Transferase(Phosphotransferase) domain 1 5 317 - -
Lja3g3213 731 MobiDBLite consensus disorder prediction 432 453 - -
Lja3g3213 731 SMART serkin_6 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3213 Lja-Chr3 62181329 62189702 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3213 10 278 CBL-interacting serine-threonine protein kinases AT2G30360 38.545 4.04e-57 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Lja3g3213 Pkinase 6.8e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3213 K08269 - gmx:100791596 1264.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3213 3 62181329 62189702 Lja3g3213 3 62181329 62189702 ECH