Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3212 ATGGCTTGGTGCCGCATTCATTGCAACCTTAATCCCCTGTTCCCGTCCGATGCGGCGCCTTTTCCGTCCACATGTCACTCTCACTCTCACTCTCACTCTCACCTCTCACTCACTCCTCGAACTTTTCCTCCTATTAATTCTCTCTTCACATCAAGAAAGATCACTTTTTCCAGTGCTCAGCGCCGCACTTTTGGGGCTGTGAGCTCACACATGACCATGGAGGAGAAGCCCATCTCTGCTGATCGAATGCTCGTGTATGTGCCTCCACATCCGTTGATCAAGCACTGGGTTTCAGTTTTGAGGAATGAACAAACTCCTTGTCCCATCTTCAAAAATGCAATGGCTGAGCTGGGAAGGTTACTTATGTATGAAGCTTCAAGGGATTGGTTGCCCACTATATCTGGAGAGATTCAATCACCAATGGGTGTTGCCTCAGTGGAGTTCATTGATCCAAGGGAGCCTGTGGCTGTAATTCCAATCTTGAGAGCCGGTCTTGCGCTTGCCGAACATGCATCATCGATCTTGCCCGCAACAAAAACCTATCATCTAGGATTAAGCCGAGATGAGGAAACACTTCAGCCAACTATATATTTGAACAAGTTACCTGACAAATTTGCAGAAGGATCTAAAGTATTTGTTGTTGATCCTATGCTAGCAACAGGTGGTACTATTGTGGCAGCCCTGAATCTCTTAAAGGATCGTGGGGTTGGCAACAAACAAATTAGAGTGATATCTGCTGTAGCTGCCCCTCCGGCGCTTCAAAAGCTGAGCGAACAGTTCCCTGGGCTTCATGTGTATACTGGAATAATTGACCCTACCGTTAATGACAAAGGGTTTATAATTCCTGGTCTTGGAGATGCTGGGGACCGCAGCTACGGTACATGA 885 0.4712 MAWCRIHCNLNPLFPSDAAPFPSTCHSHSHSHSHLSLTPRTFPPINSLFTSRKITFSSAQRRTFGAVSSHMTMEEKPISADRMLVYVPPHPLIKHWVSVLRNEQTPCPIFKNAMAELGRLLMYEASRDWLPTISGEIQSPMGVASVEFIDPREPVAVIPILRAGLALAEHASSILPATKTYHLGLSRDEETLQPTIYLNKLPDKFAEGSKVFVVDPMLATGGTIVAALNLLKDRGVGNKQIRVISAVAAPPALQKLSEQFPGLHVYTGIIDPTVNDKGFIIPGLGDAGDRSYGT* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3212 294 SUPERFAMILY PRTase-like 85 293 IPR029057 -
Lja3g3212 294 Pfam Uracil phosphoribosyltransferase 87 294 - -
Lja3g3212 294 CDD PRTases_typeI 150 270 IPR000836 -
Lja3g3212 294 Gene3D - 74 294 IPR029057 -
Lja3g3212 294 PANTHER URACIL PHOSPHORIBOSYLTRANSFERASE-LIKE 46 290 - -
Lja3g3212 294 TIGRFAM upp: uracil phosphoribosyltransferase 85 294 IPR005765 GO:0004845|GO:0006223
Lja3g3212 294 PANTHER URIDINE KINASE 46 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3212 Lja-Chr3 62142174 62148583 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3212 28 294 PRT Gene Family AT3G53900 67.037 1.55e-132 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3212 K00761 - gmx:100797953 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3212 3 62142174 62148583 Lja3g3212 3 62142174 62148583 ECH