Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3192 ATGGTTTCTAAGTGTGAGATCCTACTTGCCTTTGCAATATGCTTGCTGTTTCAGTTTCACTTGTCATCTCAGCTCCAAACCAAAGTTGAACAGCTTCCTGGCTTTCAAGGGCCTCTTCCATTTCAACTTGAAACAGGGTATGTGGGATTGGGAGAAAATGATGATGATGACATGCAAGTGTTCTACTACTTCATCAAGTCAGAGAACAACCCTCAGAAGGACCCTCTTATGCTTTGGCTAACTGGTGGTCCTGGTTGTTCTTCCTTTTCAGGCCTTGCCTTCCAGATAGGTCCACTTAAATTTGAAATCAAGGAGTATGATGGGAGCGTGCCTAATTTGGTCTTGAGGTCACAGTCCTGGACAAAGTTATGTAGCATTATTTTTGTAGATTTGCCACTTGGAACCGGCTTCTCATATGCAAAAAATGTCACTGCTCAACGAAGTGACTGGAAATTAGTTCACCATGCCCATCAATTTCTCAGGAAGTGGCTGATTGATCACCCGGAATTTCTTTCAAATGAATTTTATATGGGAGCTGATTCATACTCTGGCATTCCTGCCCCTGCTATTGTTCAAGAAATTTCAAATGGAAATGAAAAAGGTCTCCAACCATGGATAAATCTCCAGGGATATCTGCTTGGGAACCCTATTACAACATACAGAGAATTAAACTATCAAATCCCATTTGCTCATGGAATGGGTCTTATTTCTGATGAACTCTATGAGGCACTGCAGAAAAACTGTAAAGGAGAATATCAAGACATAGATTCCAGGAATGAATTGTGTTCGAGAGATGTTAAGTACTTTAATGAGTGTCTTTCAGGAATTAATACGTTTAATATTTTGGATAGCAAATGTGAAGATGATTCGCGTCTCTGGCGGAGATCTCTGACGCAGAATTTGGAGGCCTCTCTTAGTTCTCATCTCACAGTGCCAGAATTAAGCTGCCAAATTTATAGTTTTTTCCTCGCCACTAAGTGGGCTAATGATGAGAGTGTTCGCAAGGCGCTGCATATTCGAGAGGGAACTATTGGGAAATGGACACGTTGTTACACTACTGATTTTGAGTATGATATCCATGATAGCTTTGAGTTTCATGTAAATCTCAGTGCGAAAGGTTACCGTTCCTTGATTTACAGTGGGGATCATGATGCAGAAGTTCCTTTCATGTCTACTCAAGCGTGGATAAGGGCTCTAAATTACTCCATTGTGGACGATTGGAGGTCGTGGCTTGTTAATGGCCAAGTCGCAGGATACACGAGGACTTACTCGAATCGAATGACATTTGCAACTGTGAAGGGTGCAGGACATACTGCTCCTGAGTACAAGCCTGATGAAGCTTTTGCCATGTTCACTAGGTGGTTATCTAACATGCCTTTGTAA 1383 0.4179 MVSKCEILLAFAICLLFQFHLSSQLQTKVEQLPGFQGPLPFQLETGYVGLGENDDDDMQVFYYFIKSENNPQKDPLMLWLTGGPGCSSFSGLAFQIGPLKFEIKEYDGSVPNLVLRSQSWTKLCSIIFVDLPLGTGFSYAKNVTAQRSDWKLVHHAHQFLRKWLIDHPEFLSNEFYMGADSYSGIPAPAIVQEISNGNEKGLQPWINLQGYLLGNPITTYRELNYQIPFAHGMGLISDELYEALQKNCKGEYQDIDSRNELCSRDVKYFNECLSGINTFNILDSKCEDDSRLWRRSLTQNLEASLSSHLTVPELSCQIYSFFLATKWANDESVRKALHIREGTIGKWTRCYTTDFEYDIHDSFEFHVNLSAKGYRSLIYSGDHDAEVPFMSTQAWIRALNYSIVDDWRSWLVNGQVAGYTRTYSNRMTFATVKGAGHTAPEYKPDEAFAMFTRWLSNMPL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3192 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185|GO:0006508
Lja3g3192 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Lja3g3192 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Lja3g3192 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Lja3g3192 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 459 IPR001563 GO:0004185|GO:0006508
Lja3g3192 460 SUPERFAMILY alpha/beta-Hydrolases 29 459 IPR029058 -
Lja3g3192 460 Pfam Serine carboxypeptidase 33 457 IPR001563 GO:0004185|GO:0006508
Lja3g3192 460 Gene3D alpha/beta hydrolase 19 459 IPR029058 -
Lja3g3192 460 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 13 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3192 Lja-Chr3 61615781 61621132 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3192 323 460 Calmodulin-binding Proteins AT2G22960 62.590 7.20e-60 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3192 K16296 - gmx:100780069 774.237