Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3189 ATGATTTCTAAGTGTGACATCCTACTTGCCTTTGCACTATGCTTGCAGTTTCAGCTTCACATGTCATCTCAGCTTCAAACCAAAGTAGAAACGCTTCCTGGTTTTCAAGGGCCTCTACCCTTTCATCTAGAAACAGGGTATGTGGGATTGGGAGAAAATGATGATGATGACTTACAAGTGTTCTACTACTTCATTAAGTCAGAGAACAACCCTCAAAAAGACCCTCTTATGCTTTGGCTAACTGGTGGTCCTGGTTGTTCTTCCTTTTCAGGCCTTGCCTTCCAGATAGGTCCACTTGCATTTGAAATCAAGGAATATGATGGGAGCGTGCCTAATTTGGTCTTGAGGCCACAGTCCTGGACAAAGGGATGTAGCATTATTTTTTTAGATTTCCCACTTGGAACCGGCTTCTCATATGCCAAAAATCTCACTGCTCAACGAAATGACAGGAAATTAGTTCACCATGCCCATCAATTTCTCAGGAAGTGGCTGATTGATCACCCGGAATTTCTTTCAAATGAATTTTACATGGGAGGTGATTCATACTCTGGCATTTCTGTTCCGGCTATTGTTCAAGAAATTTCAAACGAAATTAATTATCAAATCCCATTTGCCCATGGAATGGGGCTTATTTCTGATGAACTCTATGAGGCACTGCAGAAAAACTGTAAAGGAGAATATATAGACAGAGATTCCAGGAATGAATTGTGTTTAAGAGATGTCAAATACTTTGATGAGTGTCTTTCAGGAATTAATATGTTGGGTATTCTGGATAGCAAATGTGAAGATGATGAACGTCTGTGGAGGAGATCTCTGACGCAGAATTTGGAGGCCTCTCTTGGTTCTCGCCTTACAGTGCCAGAATTAGGATGCCGAGAGTATAAATTTTTCCTCACCTCTAAATGGGCTAATGATAAGAGTGTTCGCAAGGCACCGCATATTCGAGAGGGAACTATAGAGAAATGGATACGTTGTGACAAAACTGATTTTGACCAGAGTACCCCCAGTGGCTTTGAGTTTCATGTAAATCTCAGTGCGAAAGGTTATCGTTCCTTGATATACAGTGGAGATCATGATGCAAGCGTTCCTTTCATGTCTACTCAAGCGTGGATAAGGGCTCTAAACTACTCCATTGTGGATGATTGGAGGCCATGGCCTGTTAATGACCAAGTTGCTGGATACACAAGGACTTACTCGAATCGAATGACATTTGCAACTGTGAAGGTAGGAATACAAGTGCTCTTTGGAGCAATATATTGCACTCGTCCAAGCGAGAGACCCCTTTTTCTAGGAACTCATTCATGTGCGCCTTCCTTGTATACAAATTTAGATGGGAATTCTACATAA 1347 0.4165 MISKCDILLAFALCLQFQLHMSSQLQTKVETLPGFQGPLPFHLETGYVGLGENDDDDLQVFYYFIKSENNPQKDPLMLWLTGGPGCSSFSGLAFQIGPLAFEIKEYDGSVPNLVLRPQSWTKGCSIIFLDFPLGTGFSYAKNLTAQRNDRKLVHHAHQFLRKWLIDHPEFLSNEFYMGGDSYSGISVPAIVQEISNEINYQIPFAHGMGLISDELYEALQKNCKGEYIDRDSRNELCLRDVKYFDECLSGINMLGILDSKCEDDERLWRRSLTQNLEASLGSRLTVPELGCREYKFFLTSKWANDKSVRKAPHIREGTIEKWIRCDKTDFDQSTPSGFEFHVNLSAKGYRSLIYSGDHDASVPFMSTQAWIRALNYSIVDDWRPWPVNDQVAGYTRTYSNRMTFATVKVGIQVLFGAIYCTRPSERPLFLGTHSCAPSLYTNLDGNST* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3189 448 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 197 IPR001563 GO:0004185|GO:0006508
Lja3g3189 448 Pfam Serine carboxypeptidase 33 199 IPR001563 GO:0004185|GO:0006508
Lja3g3189 448 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 13 197 - -
Lja3g3189 448 SUPERFAMILY alpha/beta-Hydrolases 29 408 IPR029058 -
Lja3g3189 448 Gene3D - 292 411 - -
Lja3g3189 448 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Lja3g3189 448 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Lja3g3189 448 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Lja3g3189 448 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 197 408 IPR001563 GO:0004185|GO:0006508
Lja3g3189 448 Gene3D alpha/beta hydrolase 21 272 IPR029058 -
Lja3g3189 448 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 197 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3189 Lja-Chr3 61559417 61577509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3189 298 410 Calmodulin-binding Proteins AT2G22960 57.895 6.59e-44 150