Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3185 ATGGCCTCATCATCATCTAAATCTGATCTGGTGTTTGCAGTGCGAAGGTGTGAACCAGAGCTGGTTGGTCCAGCGGAAGCGACCCCTCGTGAAGTGAAACTTCTTTCAGATATTGATGACCAAGATGGCCTACGGTTCCAAATTCCAGTGGTACAGTTCTATCGCTATGATCCATCAATGGCAGGAAAGGACCCTGTTGAGGCCATCAGAAAAGCATTGGCCAAAACACTTGTGTTTTACTATCCTTTTGCAGGTAGGCTCAGGGAAGGGCCTGGTAGGAAACTGATGGTGGATTGCACGGGTGAGGGTGTTTTGTTCATTGAGGCTGATGCTGATGTCACTCTTAACCAATTAGGTGATAATCTTCAAACTCCCTTCCCATGCATGGACGAGCTCCTTTATGAAGTTCCTGGTTCGGAGGAAATGCTTAACACACCCTTGTTGCTCATACAAGTTACGCGGCTCAAGTGTGGTGGTTTCATTTTCGCTATCCGATTAAACCACACCATGTGTGATGCGGTTGGTTTGGTTCAATTTTTGAGTGCCATTGGAGAAATGGCTCGTGGGATGCGCCAACCTTCAGTCCTACCTGTGTGGTGTAGAGAGATTCTAAGTGCAAGGGATCCACCAAGAGTGACATGCACTCATCCTGAATACGATGAACAAGTACCTTACACCAAGGAAACCACCATCCCCCTAGATGACATGGTCCACGAGTCTTTCTTCTTTGGTCCCACTGAGCTAGCTACAATTCGTAGTTTCCTTCCTTCCCATCAACTTCGCTGCACAAATTTTGAAGTTCTCACTGCATTTGTTTGGCGTTGCCGCACGATAGCATTGCAACCGAACAGTGATGAAGAGGTTCGCATACTCTGCATTGTTAATGCACGTGCCAAGCTTGACTCTCCGTTACCAACTGGTTATTATGGCAACGCCTTTGCATTTTCTCCCGCGATTACAACAGCTGGGAGGCTATGTGAAAATCCATTGGGATATGCAGTAGAGTTAGTGAAGAAGGCAAAAGCTAATATCACAAGGGAGTATATGCATTCATTAGCAGATTTAATGGCCATTAAGGGACGACCACACTTCTCTATGGAAAGATCATTTCTTGTTTCAGATTTGAAACTTGCAGGGTTCAGGCGGGTAGACTTTGGGTGGGGTAATGCTATTTATGGAGGTCTATCCAAGGGAGGAATTGGGCCCATACCTAGTTTAGCAAGCTTTAATGTTCCCTTCAAAAATGATAAAGGTGAGGAAGGTTTACTGACACCAATTTGTTTACCAGCTAAAGCCATGGAGAGGTTCATAAAAGAGCTGGATAATGTTCTGAAGAACCATAACCAACCTACTAGGGGTGGTCTAAACCCTACCTTTATCGTTTCTTCATTATAG 1395 0.4523 MASSSSKSDLVFAVRRCEPELVGPAEATPREVKLLSDIDDQDGLRFQIPVVQFYRYDPSMAGKDPVEAIRKALAKTLVFYYPFAGRLREGPGRKLMVDCTGEGVLFIEADADVTLNQLGDNLQTPFPCMDELLYEVPGSEEMLNTPLLLIQVTRLKCGGFIFAIRLNHTMCDAVGLVQFLSAIGEMARGMRQPSVLPVWCREILSARDPPRVTCTHPEYDEQVPYTKETTIPLDDMVHESFFFGPTELATIRSFLPSHQLRCTNFEVLTAFVWRCRTIALQPNSDEEVRILCIVNARAKLDSPLPTGYYGNAFAFSPAITTAGRLCENPLGYAVELVKKAKANITREYMHSLADLMAIKGRPHFSMERSFLVSDLKLAGFRRVDFGWGNAIYGGLSKGGIGPIPSLASFNVPFKNDKGEEGLLTPICLPAKAMERFIKELDNVLKNHNQPTRGGLNPTFIVSSL* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3185 464 Pfam Transferase family 17 439 - -
Lja3g3185 464 Gene3D - 10 219 IPR023213 -
Lja3g3185 464 Gene3D - 220 439 IPR023213 -
Lja3g3185 464 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 446 - -
Lja3g3185 464 PANTHER ALCOHOL ACYLTRANSFERASE 12 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3185 Lja-Chr3 61356325 61358162 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3185 21 440 Monolignol Biosynthesis Gene Families AT5G48930 30.137 1.15e-44 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3185 K19861 - gmx:100797017 696.427