Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3184 ATGGCCTCATCATCATCCAAATCTGATCTGGTGTTTGCAGTGCGAAGGCGTGAGCCAGAGCTTGTTGGTCCGGCTGAAGCGACCCCTCATGAAGTGAAACTTCTTTCAGATATTGATGACCAAGATGGCCTACGGTTTCAAATTCCAGTGGTACAATTCTATCGCTACAACCCATCAATGGCGGGGAAGGACCCTGTTGAGGCCATTAGAAAAGCATTGGCCAAAACACTTGTGTTTTACTATCCTTTTGCAGGTAGGCTTAGGGAAGGCCTTGGTAGAAAACTCATGGTGGATTGCACTGGTGAGGGTGTTCTGTTCATTGAAGCTGATGCAGATATCACTCTTAACCAATTTGGTGATAATCTTCAAACTCCCTTCCCATGCATGGATGAGCTCCTCTATGAAGTTCCTGTAACGAGGCTGAAGTGCGGTGGTTTCATATTCGCCATCCGATTAAACCACACCATGTGTGATGCGGTTGGATTGGTTCAATTTCTGAGTGCCATAGGAGAAATGGCTCGCGGGATGCCCCAACCTTCAATCCTACCAGTGTGGTGTAGAGAGATCCTAAGTGCAAGGGATTCACCAAGAGTGACATGCACTCATCCTGAATACGACGAACAAGTACCTTACCCCAAGGAAACCACCATCCCCCAAGATGACATGGTCCACGAGTCTTTCTTCTTTGGTCCAAATGAGCTAGCTACAATTCGTAGTTTCCTTCCTTCCCACCAACTTCGCTGCACAAATTTTGAAGTTCTCACCGCATTTGTTTGGCGTTGCCGCACAATAGCATTGCAACTAAACAGTGATGAGGAGGTCCGCATACTCTGCATTGTTAATGCGCGTGCCAAGCTTGACTCTCCATTACCAATTGGTTATTATGGCAACGCCTTTGCGTTTTCTCCCTCAATTACCACAGCTGGGAAGTTATGTGAAAATCCATTGGGATATGCAGTAGAGTTAGTGAGGAAAGCAAAAGCTAATATCACTAGGGAGTATTTGCATTCATTAGCAGATTTAATGGCCATTAAGGGACGACCACACTTCACTATGGACAAATCGTTTCTTGTTTCGGATTTGAAGCTTGCTGGTTTCAGGCGGGTCGACTTTGGGTGGGGTGATGCTATTTATGGAGGTCTATCCAAGGGAGGAATTGGGCCCATACCTAGTTTAGCAAGCTTTAATGTTCCCTTCAAAAATGATAAAGGTGAGGAAGGTTTACTGACTCCGATTTGTTTGTCATCTAAAGCCATGGAGAGGTTCATAAAAGAGCTAGATAATGTTCTTAAGAACCATAACCAACCTACTAGGGGTGGTCTAAACTCTGGCTTTATCGTTTCTTCATTATAG 1353 0.4508 MASSSSKSDLVFAVRRREPELVGPAEATPHEVKLLSDIDDQDGLRFQIPVVQFYRYNPSMAGKDPVEAIRKALAKTLVFYYPFAGRLREGLGRKLMVDCTGEGVLFIEADADITLNQFGDNLQTPFPCMDELLYEVPVTRLKCGGFIFAIRLNHTMCDAVGLVQFLSAIGEMARGMPQPSILPVWCREILSARDSPRVTCTHPEYDEQVPYPKETTIPQDDMVHESFFFGPNELATIRSFLPSHQLRCTNFEVLTAFVWRCRTIALQLNSDEEVRILCIVNARAKLDSPLPIGYYGNAFAFSPSITTAGKLCENPLGYAVELVRKAKANITREYLHSLADLMAIKGRPHFTMDKSFLVSDLKLAGFRRVDFGWGDAIYGGLSKGGIGPIPSLASFNVPFKNDKGEEGLLTPICLSSKAMERFIKELDNVLKNHNQPTRGGLNSGFIVSSL* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3184 450 PANTHER ALCOHOL ACYLTRANSFERASE 12 432 - -
Lja3g3184 450 Gene3D - 205 425 IPR023213 -
Lja3g3184 450 Pfam Transferase family 14 425 - -
Lja3g3184 450 Gene3D - 10 204 IPR023213 -
Lja3g3184 450 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3184 Lja-Chr3 61334444 61335838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3184 17 426 Monolignol Biosynthesis Gene Families AT5G48930 29.519 2.36e-42 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3184 K19861 - gmx:100797017 652.899