Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3183 ATGGCCTCATCATCATCCAAATCTGATCTGGTGTTTGCAGTGCGAAGGCGTGAGCCAGAGCTTGTTGGTCCGGCTGAAGCGACCCCTCATGAAGTGAAACTTCTTTCAGATATTGATGACCAAGATGGCCTACGGTTTCAAATTCCAGTGGTACAATTCTATCGCTACAACCCATCAATGGCGGGGAAGGACCCTGTTGAGGCCATTAGAAAAGCATTGGCCAAAACACTTGTGTTTTACTATCCTTTTGCAGGTAGGCTTAGGGAAGGCCTTGGTAGAAAACTCATGGTGGATTGCACTGGTGAGGGTGTTCTGTTCATTGAAGCTGATGCAGATATCACTCTTAACCAATTTGGTGATAATCTTCAAACTCCCTTCCCATGCATGGATGAGCTCCTCTATGAAGTTCCTGGTTCTGAGGAAATGCTTAACACACCCTTGCTGCTTATACAAGTAACGAGGCTGAAGTGCGGTGGTTTCATATTCGCCATCCGATTAAACCACACCATGTGTGATGCGGTTGGATTGGTTCAATTTCTGAGTGCCATAGGAGAAATGGCTCGCGGGATGCCCCAACCTTCAATCCTACCAGTGTGGTGTAGAGAGATCCTAAGTGCAAGGGATTCACCAAGAGTGACATGCACTCATCCTGAATACGACGAACAAGTACCTTACCCCAAGGAAACCACCATCCCCCAAGATGACATGGTCCACGAGTCTTTCTTCTTTGGTCCAAATGAGCTAGCTACAATTCGTAGTTTCCTTCCTTCCCACCAACTTCGCTGCACAAATTTTGAAGTTCTCACCGCATTTGTTTGGCGTTGCCGCACAATAGCATTGCAACTAAACAGTGATGAGGAGGTCCGCATACTCTGCATTGTTAATGCGCGTGCCAAGCTTGACTCTCCATTACCAATTGGTTATTATGGCAACGCCTTTGCGTTTTCTCCCTCAATTACCACAGCTGGGAAGTTATGTGAAAATCCATTGGGATATGCAGTAGAGTTAGTGAGGAAAGCAAAAGCTAATATCACTAGGGAGTATTTGCATTCATTAGCAGATTTAATGGCCATTAAGGGACGACCACACTTCACTATGGACAAATCGTTTCTTGTTTCGGATTTGAAGCTTGCTGGTTTCAGGCGGGTCGACTTTGGGTGGGGTGATGCTATTTATGGAGGTCTATCCAAGGGAGGAATTGGGCCCATACCTAGTTTAGCAAGCTTTAATGTTCCCTTCAAAAATGATAAAGGTGAGGAAGGTTTACTGACTCCGATTTGTTTGTCATCTAAAGCCATGGAGAGGTTCATAAAAGAGCTAGATAATGTTCTTAAGAACCATAACCAACCTACTAGGGGTGGTCTAAACTCTGGCTTTATCGTTTCTTCATTATAG 1395 0.4502 MASSSSKSDLVFAVRRREPELVGPAEATPHEVKLLSDIDDQDGLRFQIPVVQFYRYNPSMAGKDPVEAIRKALAKTLVFYYPFAGRLREGLGRKLMVDCTGEGVLFIEADADITLNQFGDNLQTPFPCMDELLYEVPGSEEMLNTPLLLIQVTRLKCGGFIFAIRLNHTMCDAVGLVQFLSAIGEMARGMPQPSILPVWCREILSARDSPRVTCTHPEYDEQVPYPKETTIPQDDMVHESFFFGPNELATIRSFLPSHQLRCTNFEVLTAFVWRCRTIALQLNSDEEVRILCIVNARAKLDSPLPIGYYGNAFAFSPSITTAGKLCENPLGYAVELVRKAKANITREYLHSLADLMAIKGRPHFTMDKSFLVSDLKLAGFRRVDFGWGDAIYGGLSKGGIGPIPSLASFNVPFKNDKGEEGLLTPICLSSKAMERFIKELDNVLKNHNQPTRGGLNSGFIVSSL* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3183 464 PANTHER ALCOHOL ACYLTRANSFERASE 12 446 - -
Lja3g3183 464 Gene3D - 12 218 IPR023213 -
Lja3g3183 464 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 446 - -
Lja3g3183 464 Gene3D - 219 439 IPR023213 -
Lja3g3183 464 Pfam Transferase family 14 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3183 Lja-Chr3 61277486 61279219 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3183 17 440 Monolignol Biosynthesis Gene Families AT5G48930 30.296 4.24e-47 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3183 K19861 - gmx:100797017 683.33