Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3176 ATGGCGCCAAGCACTGTGCTTGTTACTGGAGCCGGTGGTCGCACAGGACAAATAGTATATAAAACACTAAAAGAGAGGCAATATGTTGCCAGAGGTCTGGTTAGAACAGAAGAAAGCAAACAGAAAATTGGCGGTGCAGATGATGTTTTTATTGGGGATATCAGAGATGCTGGAAGTATTGTTCCTGCAATTCAAGGTATAGATGCTCTCATAATTCTTACAAGTGCAACCCCAAAAATGAAGCCTGGGTTTGATCCAACCAAAGGTGGAAGGCCTGAGTTCTATTTTGATGATGGTGCATATCCTGAACAGGTTGACTGGATTGGTCAGAAAAATCAAATAGATGCTGCTAAGGCTGCAGGAGTGAAGCGTGTTGTGTTGGTTGGGTCTATGGGTGGAACAAACCTTAACCATCCTTTGAACAGCTTGGGTAATGGGAACATATTGGTTTGGAAAAGAAAGGCTGAGCAATACCTTGCTGATTCTGGTATTCCATACACGATCATAAGGCCCGGTGGCTTGCTAGATAAAGATGGAGGTCTTCGGGAACTCATCCTAGGGAAGGATGATGAGCTTCTCCAGACTGAAACCAAAACCATTCCTAGAGCTGATGTTGCAGAAGTCTGTGTTCAGGCATTAAATTATGAGGAGACTCAGTTCAAAGCGTTTGACTTGGCATCAAAACCTGAGGGAGTTGGTACACCAACAAAGGACTTCAAGGCTTTGTTTTCCCAGATCACTTCCCGATTTTAA 753 0.4382 MAPSTVLVTGAGGRTGQIVYKTLKERQYVARGLVRTEESKQKIGGADDVFIGDIRDAGSIVPAIQGIDALIILTSATPKMKPGFDPTKGGRPEFYFDDGAYPEQVDWIGQKNQIDAAKAAGVKRVVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRPGGLLDKDGGLRELILGKDDELLQTETKTIPRADVAEVCVQALNYEETQFKAFDLASKPEGVGTPTKDFKALFSQITSRF* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3176 250 Gene3D - 3 250 - -
Lja3g3176 250 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 228 IPR036291 -
Lja3g3176 250 PANTHER NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED 3 250 IPR044163 GO:0016491
Lja3g3176 250 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 3 250 - -
Lja3g3176 250 CDD SDR_a5 5 225 - -
Lja3g3176 250 Pfam NAD(P)H-binding 10 214 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3176 Lja-Chr3 61054314 61058878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3176 6 137 Monolignol Biosynthesis Gene Families AT1G80820 30.714 2.81e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3176 - - cam:101512195 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3176 3 61054314 61058878 Lja3g3176 3 61054314 61058878 ECH