Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3155 ATGGCTCACATTCCCCAAACCCAGGTCATTCACCATGTCTGTACCAATTTAACATTGGGTGAGTGTCCTTGTGACAAAAGTTTGCCATGTCCCTTTATACCCATTGTTAATGATGGAAGCCAAAGTCGTCACACAAAGATGAAGGATCCTGCACCTGCTGAACCTAGAAGGTGGGGCTACTCCACCGATTTGATGCTTTATGATGATCCATGGAAGATAAGGAAAAGGCTCACTGTGAGTGATCTTGGAAACTTGAGAAGACTCTTGTTGCACAAAGACTTGGTTGAGGGCTTGGTGCTTCCTGTGTTGAGCTCCGAGGCCCAAACCGAGGCTTTGAGTGAAAATGGAACCATAGTTTCAATTTGGGATGTGGACACTGAATCCATGCATTATATGGTTTTTAAGCAATGGGTTTCTTCAAAAAGCTATGTTTTCATTGATGACTGGACCAATAATTTTGTGAGAAGAAGGGGTTTGAAGATAGGGGATGAAATTAGACTTCACTGGGATCCATACAATAACCGCTTTAATTTTTCTGTTCTTTACAATTAG 552 0.4203 MAHIPQTQVIHHVCTNLTLGECPCDKSLPCPFIPIVNDGSQSRHTKMKDPAPAEPRRWGYSTDLMLYDDPWKIRKRLTVSDLGNLRRLLLHKDLVEGLVLPVLSSEAQTEALSENGTIVSIWDVDTESMHYMVFKQWVSSKSYVFIDDWTNNFVRRRGLKIGDEIRLHWDPYNNRFNFSVLYN* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3155 183 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 40 181 - -
Lja3g3155 183 CDD B3_DNA 71 181 IPR003340 GO:0003677
Lja3g3155 183 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 40 181 - -
Lja3g3155 183 Gene3D - 70 180 IPR015300 -
Lja3g3155 183 SUPERFAMILY DNA-binding pseudobarrel domain 69 177 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3155 Lja-Chr3 60525053 60525604 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3155 69 176 B3 DNA Binding Superfamily AT3G26790 29.204 1.11e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3155 - - lang:109344557 196.438