Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3139 ATGCAGCCTTTCTCATCATCATCACCTATGGATCCCTCGGTGAGAGGTCGAAGTGATCGCTGTTTCTTTGAGGGTGAGATGAAGGGTGACGTGGAACTGCCGGTGGGAGATTTGCATGCTGGCCTTGTTGATTATGGTGCCATGGATTTCACAGATGGTTTAACAGTGAAAGAAAGAGAGATGTGGTTTCACAGTGACCAAGAAGAATTTCTTGCGATGAATGATGAAGCTTCAATGTTCTATTATGAATTCCCTCCTCTCCCTGACTTTCCTTGCACGGTGCCACCTTCACCATCATCATTGTCATTTCCTTTCGCAACAACAGCACCTGCAAAGACAACAACATGCTCCCCCTCTTCAAATTTAGGGGCTGTTTTAGAATCAGATCATGAGCAAGATGCAGAGGAATTAATCAAGCAGCTGCATGATCCAATGAGTGTGACGTTAAAGAAAGCAACCATAGAGGCTGCTGCTAAGAGTTTGGGAAGAGGGAAAGAAGGGTTGAAGCAATTGCTTAAGCTTGTTCTTGAATGGGTTCAAGAGAGTCATCTTCAAAATAAAAAGCGAAAGAAAAATAACACACCTTTAAATGTTCTCTCCCAATATCAGGTTCCTACCCAAAACCACAACACAATCCCTGCCTCTAATTATCTGGATCCAAGCTCATTTAGACCCGCACTCAACCCTTATTTCTGTTACCCATTATGGATTCCTCAACCAATTTTTGGAGTAGGTCCAAGTGTGTTTTCCCCACCCATTGTTGGGTATGTGGGTGACCCTTACACAAAAGGTTCTTCAAATAACATCAATGGCACCCATAACAATGTTGATTATAACATGCCAAAATCTGCATATTCATGGCCTCATTCTCATTTCACTGCTGCTTCTCACCAAACCCATGGCCCCAGTGGTGATAAATTGAAGAGATCAAGATCCTTAGCTACCAAAGAAGCGAGGAAGAAGAGGATGGAGAAGTATGTGTCTCATCATAGGCATCACAATCAACACTGCGCACGCGAAAAACAGAACCAACACCAACTGAGTCTAACTGATGCTGAGCCAATAGTAATGGGAAGTAGCAATTGCACTGTTATTGTAACAGGACATACAAGTCTATCCAAAGGAGCTTTAGTGGTGCCAACGATGGCTGCTGAACAGGTGAACGAAGGACAGTTGGTGATGGACAGGAATGTCGTTCAAACCCATAATTATTATCAGGGTTATACCTTATCAGATTTGCAAAAGGTGAGATTCAATCTTATTTGA 1266 0.4289 MQPFSSSSPMDPSVRGRSDRCFFEGEMKGDVELPVGDLHAGLVDYGAMDFTDGLTVKEREMWFHSDQEEFLAMNDEASMFYYEFPPLPDFPCTVPPSPSSLSFPFATTAPAKTTTCSPSSNLGAVLESDHEQDAEELIKQLHDPMSVTLKKATIEAAAKSLGRGKEGLKQLLKLVLEWVQESHLQNKKRKKNNTPLNVLSQYQVPTQNHNTIPASNYLDPSSFRPALNPYFCYPLWIPQPIFGVGPSVFSPPIVGYVGDPYTKGSSNNINGTHNNVDYNMPKSAYSWPHSHFTAASHQTHGPSGDKLKRSRSLATKEARKKRMEKYVSHHRHHNQHCAREKQNQHQLSLTDAEPIVMGSSNCTVIVTGHTSLSKGALVVPTMAAEQVNEGQLVMDRNVVQTHNYYQGYTLSDLQKVRFNLI* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3139 421 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 136 354 IPR044800 GO:0003700
Lja3g3139 421 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 136 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3139 Lja-Chr3 59965328 59967406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3139 142 333 B3 DNA Binding Superfamily AT3G24650 32.479 1.99e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3139 - - lja:Lj0g3v0221479.1 572.392